The Datafile PD-CD 5/DATAFILE_PDCD5.iso/rasmol/scipts/mhc/!MHC/MHC1EZ_SCR

Text File | 1995-09-30 | 17KB | 666 lines

#!rasmol -script
# File: MHC1EZ.SCR
# Creator: RasMol Version 2.6

background [0,0,0]
zap
load pdb "H2K-SEND.PDB"
set ambient 60
set specular off

reset
slab off
rotate z 2
rotate y -59
rotate x 171
translate x 3
translate y 60
zoom 250

set bonds off
set axes off
set boundingbox off
set unitcell off
set bondmode and
dots off


# Avoid Colour Problems!
select all
colour bonds none
colour backbone none
colour hbonds none
colour ssbonds none
colour ribbons none
colour white

# Atoms
select (atomno>=1) and (atomno<=11)
colour atoms [255,255,255]
select (atomno>=12) and (atomno<=95)
colour atoms [255,200,0]
select (atomno>=96) and (atomno<=112)
colour atoms [255,255,255]
select (atomno>=113) and (atomno<=144)
colour atoms [96,128,255]
select (atomno>=145) and (atomno<=151)
colour atoms [255,255,255]
select (atomno>=152) and (atomno<=221)
colour atoms [255,200,0]
select (atomno>=222) and (atomno<=237)
colour atoms [96,128,255]
select (atomno>=238) and (atomno<=253)
colour atoms [255,200,0]
select (atomno>=254) and (atomno<=264)
colour atoms [255,255,255]
select (atomno>=265) and (atomno<=301)
colour atoms [255,200,0]
select (atomno>=302) and (atomno<=337)
colour atoms [96,128,255]
select (atomno>=338) and (atomno<=367)
colour atoms [255,255,255]
select (atomno>=368) and (atomno<=383)
colour atoms [255,200,0]
select (atomno>=384) and (atomno<=394)
colour atoms [255,255,255]
select (atomno>=395) and (atomno<=399)
colour atoms [96,128,255]
select (atomno>=400) and (atomno<=450)
colour atoms [255,0,128]
select (atomno>=451) and (atomno<=459)
colour atoms [96,128,255]
select (atomno>=460) and (atomno<=463)
colour atoms [255,255,255]
select (atomno>=464) and (atomno<=716)
colour atoms [255,0,128]
select (atomno>=717) and (atomno<=739)
colour atoms [255,255,255]
select (atomno>=740) and (atomno<=756)
colour atoms [96,128,255]
select (atomno>=757) and (atomno<=772)
colour atoms [255,255,255]
select (atomno>=773) and (atomno<=843)
colour atoms [255,200,0]
select (atomno>=844) and (atomno<=847)
colour atoms [255,255,255]
select (atomno>=848) and (atomno<=861)
colour atoms [96,128,255]
select (atomno>=862) and (atomno<=876)
colour atoms [255,255,255]
select (atomno>=877) and (atomno<=884)
colour atoms [255,200,0]
select (atomno>=885) and (atomno<=892)
colour atoms [255,255,255]
select (atomno>=893) and (atomno<=966)
colour atoms [255,200,0]
select (atomno>=967) and (atomno<=978)
colour atoms [96,128,255]
select (atomno>=979) and (atomno<=992)
colour atoms [255,200,0]
select (atomno>=993) and (atomno<=1004)
colour atoms [255,255,255]
select (atomno>=1005) and (atomno<=1025)
colour atoms [255,200,0]
select (atomno>=1026) and (atomno<=1033)
colour atoms [255,255,255]
select (atomno>=1034) and (atomno<=1067)
colour atoms [96,128,255]
select (atomno>=1068) and (atomno<=1074)
colour atoms [255,255,255]
select (atomno>=1075) and (atomno<=1100)
colour atoms [255,200,0]
select (atomno>=1101) and (atomno<=1113)
colour atoms [96,128,255]
select (atomno>=1114) and (atomno<=1214)
colour atoms [255,0,128]
select (atomno>=1215) and (atomno<=1219)
colour atoms [96,128,255]
select (atomno>=1220) and (atomno<=1223)
colour atoms [255,255,255]
select (atomno>=1224) and (atomno<=1310)
colour atoms [255,0,128]
select (atomno>=1311) and (atomno<=1314)
colour atoms [96,128,255]
select (atomno>=1315) and (atomno<=1424)
colour atoms [255,0,128]
select (atomno>=1425) and (atomno<=1428)
colour atoms [96,128,255]
select (atomno>=1429) and (atomno<=1456)
colour atoms [255,0,128]
select (atomno>=1457) and (atomno<=1464)
colour atoms [96,128,255]
select (atomno>=1465) and (atomno<=1482)
colour atoms [255,255,255]
select (atomno>=1483) and (atomno<=2232)
colour atoms [255,0,0]
select (atomno>=2234) and (atomno<=3054)
colour atoms [0,255,255]
select (atomno>=3056) and (atomno<=3215)
colour atoms cpk
select all
spacefill off

# Bonds
wireframe off
select (atomno=3123) or (atomno==3117)
wireframe 125
select (atomno=3122) or (atomno==3120)
wireframe 125
select (atomno=3121) or (atomno==3120)
wireframe 125
select (atomno=3120) or (atomno==3119)
wireframe 125
select (atomno=3119) or (atomno==3116)
wireframe 125
select (atomno=3118) or (atomno==3117)
wireframe 125
select (atomno=3117) or (atomno==3116)
wireframe 125
select (atomno=3116) or (atomno==3115)
wireframe 125
select (atomno=3115) or (atomno==3112)
wireframe 125
select (atomno=3114) or (atomno==3111)
wireframe 125
select (atomno=3113) or (atomno==3112)
wireframe 125
select (atomno=3112) or (atomno==3111)
wireframe 125
select (atomno=3111) or (atomno==3110)
wireframe 125
select (atomno=3110) or (atomno==3105)
wireframe 125
select (atomno=3109) or (atomno==3108)
wireframe 125
select (atomno=3109) or (atomno==3103)
wireframe 125
select (atomno=3108) or (atomno==3107)
wireframe 125
select (atomno=3107) or (atomno==3104)
wireframe 125
select (atomno=3106) or (atomno==3105)
wireframe 125
select (atomno=3105) or (atomno==3104)
wireframe 125
select (atomno=3104) or (atomno==3103)
wireframe 125
select (atomno=3103) or (atomno==3093)
wireframe 125
select (atomno=3102) or (atomno==3101)
wireframe 125
select (atomno=3101) or (atomno==3100)
wireframe 125
select (atomno=3101) or (atomno==3099)
wireframe 125
select (atomno=3100) or (atomno==3098)
wireframe 125
select (atomno=3099) or (atomno==3097)
wireframe 125
select (atomno=3098) or (atomno==3096)
wireframe 125
select (atomno=3097) or (atomno==3096)
wireframe 125
select (atomno=3096) or (atomno==3095)
wireframe 125
select (atomno=3095) or (atomno==3092)
wireframe 125
select (atomno=3094) or (atomno==3093)
wireframe 125
select (atomno=3093) or (atomno==3092)
wireframe 125
select (atomno=3092) or (atomno==3091)
wireframe 125
select (atomno=3091) or (atomno==3085)
wireframe 125
select (atomno=3090) or (atomno==3088)
wireframe 125
select (atomno=3089) or (atomno==3088)
wireframe 125
select (atomno=3088) or (atomno==3087)
wireframe 125
select (atomno=3087) or (atomno==3084)
wireframe 125
select (atomno=3086) or (atomno==3085)
wireframe 125
select (atomno=3085) or (atomno==3084)
wireframe 125
select (atomno=3084) or (atomno==3083)
wireframe 125
select (atomno=3083) or (atomno==3081)
wireframe 125
select (atomno=3082) or (atomno==3081)
wireframe 125
select (atomno=3081) or (atomno==3080)
wireframe 125
select (atomno=3080) or (atomno==3079)
wireframe 125
select (atomno=3079) or (atomno==3074)
wireframe 125
select (atomno=3078) or (atomno==3072)
wireframe 125
select (atomno=3078) or (atomno==3077)
wireframe 125
select (atomno=3077) or (atomno==3076)
wireframe 125
select (atomno=3076) or (atomno==3073)
wireframe 125
select (atomno=3075) or (atomno==3074)
wireframe 125
select (atomno=3074) or (atomno==3073)
wireframe 125
select (atomno=3073) or (atomno==3072)
wireframe 125
select (atomno=3072) or (atomno==3069)
wireframe 125
select (atomno=3071) or (atomno==3068)
wireframe 125
select (atomno=3070) or (atomno==3069)
wireframe 125
select (atomno=3069) or (atomno==3068)
wireframe 125
select (atomno=3068) or (atomno==3067)
wireframe 125
select (atomno=3067) or (atomno==3058)
wireframe 125
select (atomno=3066) or (atomno==3065)
wireframe 125
select (atomno=3066) or (atomno==3064)
wireframe 125
select (atomno=3065) or (atomno==3063)
wireframe 125
select (atomno=3064) or (atomno==3062)
wireframe 125
select (atomno=3063) or (atomno==3061)
wireframe 125
select (atomno=3062) or (atomno==3061)
wireframe 125
select (atomno=3061) or (atomno==3060)
wireframe 125
select (atomno=3060) or (atomno==3057)
wireframe 125
select (atomno=3059) or (atomno==3058)
wireframe 125
select (atomno=3058) or (atomno==3057)
wireframe 125
select (atomno=3057) or (atomno==3056)
wireframe 125

# Ribbons
select all
ribbons off

# Backbone
backbone off
select (atomno=1477) or (atomno==1466)
backbone on
select (atomno=1466) or (atomno==1458)
backbone on
select (atomno=1458) or (atomno==1450)
backbone on
select (atomno=1450) or (atomno==1443)
backbone