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- Subject: FAQ: comp.ai.genetic part 5/6 (A Guide to Frequently Asked Questions)
- Newsgroups: comp.ai.genetic,comp.answers,news.answers
- From: David.Beasley@cm.cf.ac.uk (David Beasley)
- Date: Tue, 20 Sep 94 09:06:24 GMT
-
- Archive-name: ai-faq/genetic/part5
- Last-Modified: 9/20/94
- Issue: 2.3
-
- TABLE OF CONTENTS OF PART 5
- Q20: What EA software packages are available?
- Q20.1: Free software packages?
- Q20.2: Commercial software packages?
- Q20.3: Current research projects?
-
- ----------------------------------------------------------------------
-
- Subject: Q20: What EA software packages are available?
-
- This gives a list of all known EA software packages available to the
- public. The list was originally maintained by Nici Schraudolph. In
- June '93 it was agreed that it would be incorporated into this FAQ
- and the responsibility for maintenance taken over by the FAQ editor.
-
- A copy of most of the packages described below are kept at ENCORE,
- (See Q15.3), available by anonymous FTP.
-
- Most GENETIC PROGRAMMING software is archived by Jim McCoy
- <mccoy@ccwf.cc.utexas.edu>. Available by FTP in:
- ftp.cc.utexas.edu:/pub/genetic-programming/ directory there are
- subdirectories containing papers related to GP, archives of the
- mailing list, as well as a suite of programs for implementing GP.
- These programs include the Lisp code from Koza's "Genetic
- Programming" [KOZA92], as well as implementations in C and C++, as
- for example SGPC: Simple Genetic Programming in C by Walter Alden
- Tackett and Aviram Carmi <gpc@ipld01.hac.com>.
-
- A survey paper entitled "Genetic Algorithm Programming Environments"
- was published in IEEE Computer in the February 1994 issue. Written
- by Filho, Alippi and Treleaven of University College, London, UK.
- It's available by FTP as
- bells.cs.ucl.ac.uk:/papagena/game/docs/gasurvey.ps
-
- PLEASE NOTE
- For many of these software packages, specific ordering instructions
- are given in the descriptions below (see Q20.1, Q20.2, Q20.3).
- Please read and follow them before unnecessarily bothering the listed
- author or contact! Also note that these programs haven't been
- independently tested, so there are no guarantees of their quality.
-
- A major revision was undertaken in August 1994, when all authors were
- contacted, and asked to confirm the accuracy of the information
- contained here. A few authors did not respond to the request for
- information. These are noted below by: (Unverified 8/94). In these
- cases, FTP address were checked by the FAQ editor, to confirm that
- this information (at least) is correct. In two cases, email to the
- author bounced back as "undeliverable" -- these are noted below.
-
- Legend
- Type (this is a very ad-hoc classification)
-
- GE: generational GA
- SS: steady-state GA
- PA: (pseudo) parallel GA
- ES: evolution strategy
- OO: object-oriented
- XP: expert system
- ED: educational/demo
- CF: classifier system
-
- OS Operating System; X11 implies Unix; "Win" means Microsoft
- Windows 3.x/NT (PC); "DOS" means MS-DOS or compatibles.
-
- Lang Programming Language; in parentheses: source code not included;
- "TPas" = Think Pascal, "OPas" = MPW Object Pascal
- Price
- (1) free to government contractors, $221 otherwise, (2)
- educational discount available, (3) available as addendum to a
- book, (4) single 1850 DM, site license 5200 DM, (5) single 200
- DM, site license 500 DM, (6) free for academic and educational
- use.
-
- Author or Contact
- given as Internet e-mail address if possible
-
- ES/GA/XP System Implementations:
-
- =========================================================================
- Name Type OS Lang Price Author/Contact
- =========================================================================
-
- BUGS GE, X11, C free Joshua Smith
- ED Suntools <jrs@media.mit.edu>
-
- DGenesis GE, Unix C free Erick Cantu-Paz
- PA,ED <ecantu@lamport.rhon.itam.mx>
-
- DOUGAL SS, DOS Turbo free Brett Parker
- GE Pascal <b.s.parker@durham.ac.uk>
-
- ESCaPaDE ES Unix C free Frank Hoffmeister <hoffmeister@
- ls11.informatik.uni-dortmund.de>
-
- Evolution GE, DOS C free Hans-Michael Voigt and
- Machine ES Joachim Born
- <voigt@max.fb10.tu-berlin.de>
-
- GAC, GE Unix C free Bill Spears
- GAL " " Lisp " <spears@aic.nrl.navy.mil>
-
- GAGA GE Unix C free Jon Crowcroft
- <jon@cs.ucl.ac.uk>
-
- GAGS GE, Unix, C++ free JJ Merelo
- SS,OO DOS <jmerelo@kal-el.ugr.es>
-
- GALOPPS GE, Unix, C free Erik Goodman
- PA DOS <goodman@egr.msu.edu>
-
- GANNET GE, Unix C free Darrell Duane
- NN <dduane@fame.gmu.edu>
-
- GAucsd GE Unix C free Nici Schraudolph
- <GAucsd-request@cs.ucsd.edu>
-
- GA GE, DOS (C++) free Mark Hughes
- Workbench ED <mrh@i2ltd.demon.co.uk>
-
- GECO GE, Unix, Lisp free George P. W. Williams, Jr.
- OO,ED MacOS <george@hsvaic.hv.boeing.com>
-
- Genesis GE, Unix, C free John Grefenstette
- ED DOS <gref@aic.nrl.navy.mil>
-
- GENEsYs GE Unix C free Thomas Baeck <baeck@
- ls11.informatik.uni-dortmund.de>
-
- GenET SS, Unix, C free Cezary Z. Janikow
- ES,ED X, etc. <janikow@radom.umsl.edu>
-
- Genie GE Mac TPas free Lance Chambers
- <pstamp@yarrow.wt.uwa.edu.au>
-
- Genitor SS Unix C free Darrell Whitley
- <whitley@cs.colostate.edu>
-
- GENlib SS Unix, C (6) Jochen Ruhland <jochenr@
- DOS neuro.informatik.uni-kassel.de>
-
- GENOCOP GE Unix C free Zbigniew Michalewicz
- <zbyszek@uncc.edu>
-
- GIGA SS Unix C free Joe Culberson
- <joe@cs.ualberta.ca>
-
- LibGA GE, Unix/DOS C free Art Corcoran
- SS,ED NeXT/Amiga <corcoran@penguin.mcs.utulsa.edu>
-
- LICE ES Unix, C free Joachim Sprave
- DOS <joe@ls11.informatik.uni-dortmund.de>
-
- mGA GE Unix C, free Dave Goldberg
- Lisp <goldberg@vmd.cso.uiuc.edu>
-
- PARAGenesis PA, CM C* free Michael van Lent
- GE <vanlent@eecs.umich.edu>
-
- PGA PA, Unix, C free Peter Ross
- SS,GE etc. <peter@aisb.ed.ac.uk>
-
- SGA-C, GE Unix C free Robert E. Smith
- SGA-Cube nCube <rob@comec4.mh.ua.edu>
-
- Splicer GE Mac, C (1) Steve Bayer
- X11
-
- TOLKIEN OO, Unix, C++ free Anthony Yiu-Cheung Tang
- GE DOS <tang028@cs.cuhk.hk>
-
- WOLF SS Unix C free David Rogers
- <drogers@msi.com>
- =========================================================================
-
-
-
- Classifier System Implementations:
-
- =========================================================================
- Name Type OS Lang Price Author/Contact
- =========================================================================
-
- CFS-C CF, Unix/DOS C free Rick Riolo
- ED <rlr@merit.edu>
-
- SCS-C CF, Unix/DOS C free Joerg Heitkoetter
- ED Atari TOS <joke@Germany.EU.net>
- ==========================================================================
-
-
-
- Commercial Packages:
-
- =========================================================================
- Name Type OS Lang Price Author/Contact
- =========================================================================
-
- EnGENEer OO, X11 C ? George Robbins,
- GA Logica Cambridge Ltd.
-
- EvoFrame/ OO, Mac, C++/ (4,2) Optimum Software
- REALizer ES DOS OPas (5,2) <optimum@applelink.apple.com>
-
- Evolver GE DOS, (C, $345 Phil Rybeck, Axcelis Inc.
- Mac Pascal)
-
- GAME OO, X11 C++ (3) Jose R. Filho
- GA <zeluiz@cs.ucl.ac.uk>
-
- MicroGA/ OO, Mac, C++ $249 Emergent Behavior, Inc.
- Galapagos SS Win (2) <emergent@aol.com>
-
- Omega ? DOS ? ? David Barrow, KiQ Ltd.
-
- OOGA OO, Mac, Lisp $60 Lawrence Davis
- GE DOS
-
- PC/Beagle XP DOS ? 69UKP Richard Forsyth
-
- XpertRule/XP DOS (TPas) 995UKP Attar Software
- GenAsys
-
- XYpe SS Mac (C) $725 Ed Swartz, Virtual Image Inc.
- =========================================================================
-
-
-
-
-
- ------------------------------
-
- Subject: Q20.1: Free software packages?
-
- BUGS:
- BUGS (Better to Use Genetic Systems) is an interactive program for
- demonstrating the GENETIC ALGORITHM and is written in the spirit of
- Richard Dawkins' celebrated Blind Watchmaker software. The user can
- play god (or `GA FITNESS function,' more accurately) and try to
- evolve lifelike organisms (curves). Playing with BUGS is an easy way
- to get an understanding of how and why the GA works. In addition to
- demonstrating the basic GENETIC OPERATORs (SELECTION, CROSSOVER, and
- MUTATION), it allows users to easily see and understand phenomena
- such as GENETIC DRIFT and premature convergence. BUGS is written in C
- and runs under Suntools and X Windows.
-
- BUGS was written by Joshua Smith <jrs@media.mit.edu> at Williams
- College and is available by FTP from
- santafe.edu:/pub/misc/BUGS/BUGS.tar.Z and from
- ftp.aic.nrl.navy.mil:/pub/galist/src/ga/BUGS.tar.Z Note that it is
- unsupported software, copyrighted but freely distributable. Address:
- Room E15-492, MIT Media Lab, 20 Ames Street, Cambridge, MA 02139.
- (Unverified 8/94).
-
- DGenesis:
- DGenesis is a distributed implementation of a Parallel GA. It is
- based on Genesis 5.0. It runs on a network of UNIX workstations. It
- has been tested with DECstations, microVAXes, Sun Workstations and
- PCs running 386BSD 0.1. Each subpopulation is handled by a UNIX
- process and the communication between them is accomplished using
- Berkeley sockets. The system is programmed in C and is available free
- of charge by anonymous FTP from lamport.rhon.itam.mx:/ and from
- ftp.aic.nrl.navy.mil:/pub/galist/src/ga/dgenesis-1.0.tar.Z
-
- DGenesis allows the user to set the MIGRATION interval, the migration
- rate and the topology between the SUB-POPULATIONs. There has not
- been much work investigating the effect of the topology on the
- PERFORMANCE of the GA, DGenesis was written specifically to encourage
- experimentation in this area. It still needs many refinements, but
- some may find it useful.
-
- Contact Erick Cantu-Paz <ecantu@lamport.rhon.itam.mx> at the
- Instituto Tecnologico Autonomo de Mexico (ITAM)
-
- Dougal:
- DOUGAL is a demonstration program for solving the TRAVELLING SALESMAN
- PROBLEM using GAs. The system guides the user through the GA,
- allowing them to see the results of altering parameters relating to
- CROSSOVER, MUTATION etc. The system demonstrates graphicaly the
- OPTIMIZATION of the route. The options open to the user to
- experiment with include percentage CROSSOVER and MUTATION, POPULATION
- size, steady state or generational replacement, FITNESS technique
- (linear normalised, is evaluation, etc).
-
- DOUGAL requires an IBM compatible PC with a VGA monitor. The
- software is free, however I would appreciate feedback on what you
- think of the software.
-
- Dougal is available by FTP from ENCORE (see Q15.3) in file
- EC/GA/src/dougal.zip It's pkzipped and contains executable, vga
- driver, source code and full documentation. It is important to place
- the vga driver (egavga.bgi) in the same directory as DOUGAL. Author:
- Brett Parker, 7 Glencourse, East Boldon, Tyne + Wear, NE36 0LW,
- England. <b.s.parker@durham.ac.uk>
-
- ESCaPaDE:
- ESCaPaDE is a sophisticated software environment to run experiments
- with Evolutionary Algorithms, such as e.g. an EVOLUTION STRATEGY.
- The main support for experimental work is provided by two internal
- tables: (1) a table of objective functions and (2) a table of so-
- called data monitors, which allow easy implementation of functions
- for monitoring all types of information inside the Evolutionary
- Algorithm under experiment.
-
- ESCaPaDE 1.2 comes with the KORR implementation of the EVOLUTION
- STRATEGY by H.-P. Schwefel which offers simple and correlated
- MUTATIONs. KORR is provided as a FORTRAN 77 subroutine, and its
- cross-compiled C version is used internally by ESCaPaDE.
-
- An extended version of the package was used for several
- investigations so far and has proven to be very reliable. The
- software and its documentation is fully copyrighted although it may
- be freely used for scientific work; it requires 5-6 MB of disk space.
-
- In order to obtain ESCaPaDE, please send a message to the e-mail
- address below. The SUBJECT line should contain 'help' or 'get
- ESCaPaDE'. (If the subject lines is invalid, your mail will be
- ignored!). For more information contact: Frank Hoffmeister, Systems
- Analysis Research Group, LSXI, Department of Computer Science,
- University of Dortmund, D-44221 Dortmund, Germany. Net:
- <hoffmeister@ls11.informatik.uni-dortmund.de>
-
- Evolution Machine:
- The Evolution Machine (EM) is universally applicable to continuous
- (real-coded) OPTIMIZATION problems. In the EM we have coded
- fundamental evolutionary algorithms (GENETIC ALGORITHMs and
- EVOLUTION STRATEGIEs), and added some of our approaches to
- evolutionary search.
-
- The EM includes extensive menu techniques with:
-
- o Default parameter setting for unexperienced users.
-
- o Well-defined entries for EM-control by freaks of the EM, who
- want to leave the standard process control.
-
- o Data processing for repeated runs (with or without change of the
- strategy parameters).
-
- o Graphical presentation of results: online presentation of the
- EVOLUTION progress, one-, two- and three-dimensional graphic
- output to analyse the FITNESS function and the evolution process.
-
- o Integration of calling MS-DOS utilities (Turbo C).
-
- We provide the EM-software in object code, which can be run on PC's
- with MS-DOS and Turbo C, v2.0, resp. Turbo C++,v1.01. The Manual to
- the EM is included in the distribution kit.
-
- The EM software is available by FTP from ftp-bionik.fb10.tu-
- berlin.de:/pub/software/Evolution-Machine/ This directory contains
- the compressed files em_tc.exe (Turbo C), em_tcp.exe (Turbo C++) and
- em_man.exe (the manual). There is also em-man.ps.Z, a compressed
- PostScript file of the manual. If you do not have FTP access, please
- send us either 5 1/4 or 3 1/2 MS-DOS compatible disks. We will return
- them with the compressed files (834 kB).
-
- Official contact information: Hans-Michael Voigt or Joachim Born,
- Technical University Berlin, Bionics and EVOLUTION Techniques
- Laboratory, Bio- and Neuroinformatics Research Group, Ackerstrasse
- 71-76 (ACK1), D-13355 Berlin, Germany. Net: <{voigt,born}@fb10.tu-
- berlin.de> (Unverified 8/94).
-
- GAC, GAL:
- Bill Spears <spears@aic.nrl.navy.mil> writes: These are packages I've
- been using for a few years. GAC is a GA written in C. GAL is my
- Common Lisp version. They are similar in spirit to John
- Grefenstette's Genesis, but they don't have all the nice bells and
- whistles. Both versions currently run on Sun workstations. If you
- have something else, you might need to do a little modification.
-
- Both versions are free: All I ask is that I be credited when it is
- appropriate. Also, I would appreciate hearing about improvements!
- This software is the property of the US Department of the Navy.
-
- The code will be in a "shar" format that will be easy to install.
- This code is "as is", however. There is a README and some
- documentation in the code. There is NO user's guide, though (nor am I
- planning on writing one at this time). I am interested in hearing
- about bugs, but I may not get around to fixing them for a while.
- Also, I will be unable to answer many questions about the code, or
- about GAs in general. This is not due to a lack of interest, but due
- to a lack of free time!
-
- Available by FTP from
- ftp.aic.nrl.navy.mil:/pub/galist/src/ga/GAC.shar.Z and GAL.shar.Z .
- PostScript versions of some papers are under "/pub/spears". Feel
- free to browse.
-
-
- GAGA:
- GAGA (GA for General Application) is a self-contained, re-entrant
- procedure which is suitable for the minimization of many "difficult"
- cost functions. Originally written in Pascal by Ian Poole, it was
- rewritten in C by Jon Crowcroft. GAGA can be obtained by request from
- the author: Jon Crowcroft <jon@cs.ucl.ac.uk>, Univeristy College
- London, Gower Street, London WCIE 6BT, UK, or by FTP from
- ftp://cs.ucl.ac.uk:/darpa/gaga.shar
-
- GAGS:
- GAGS 0.92 (Genetic Algorithms from Granada, Spain) is a library and
- companion programs written and designed to take the heat out of
- designing a GENETIC ALGORITHM. It features a class library for
- genetic algorithm programming, but, from the user point of view, is a
- genetic algorithm application generator. Just write the function you
- want to optimize, and GAGS surrounds it with enough code to have a
- genetic algorithm up and running, compiles it, and runs it. GAGS Is
- written in C++, so that it can be compiled in any platform running
- this GNU utility. It has been tested on various machines.
- Documentation is available.
-
- GAGS includes:
-
- o Steady-state, roulette-wheel, tournament and elitist SELECTION.
-
- o FITNESS evaluation using training files.
-
- o Graphics output through gnuplot.
-
- o Uniform and 2-point CROSSOVER, and bit-flip and gene-transposition
- MUTATION.
-
- o Variable length CHROMOSOMEs and related operators.
-
- The application generator gags.pl is written in perl, so this
- language must also be installed before GAGS. Available by FTP from:
- kal-el.ugr.es:/pub/GAGS-0.92.tar.gz The programmer's manual is in the
- same directory, file gagsprogs.ps.gz. GAGS is also available from
- ENCORE (see Q15.3) in file EC/GA/src/gags-0.92.tar.gz with
- documentation in EC/GA/docs/gagsprog.ps.gz
-
- Maintained by J.J. Merelo, Grupo Geneura, Univ. Granada <jmerelo@kal-
- el.ugr.es>
-
- GALOPPS:
- GALOPPS (Genetic Algorithm Optimized for Portability and Parallelism)
- is a flexible, generic GA, based upon SGA-C. It has been extended to
- provide three types of island parallelism, ranging from a single PC
- simulating parallel subpopulations, to multiple computers on a
- network. It's been tested on a wide variety of DOS and UNIX
- machines. An 80-page User Guide is provided.
-
- GALOPPS extends the SGA capabilities several fold:
-
- o 5 SELECTION methods.
-
- o Random or superuniform initialization of binary CHROMOSOMEs.
-
- o 3 CROSSOVER routines for value-based representations, and 4 for
- order-based reps.
-
- o 3 MUTATION routines.
-
- o 4 FITNESS scaling routines.
-
- o Various replacement strategy options, including crowding
- replacement and new incest-reduction option.
-
- o Elitism is optional.
-
- o Convergence: lost, converged, percent converged, etc.
-
- o Various PERFORMANCE measures
- o Uses "SGA philosophy" of one template file for the user to modify,
- but enriched with many additional user callbacks, for added
- flexibility, extensibility.
-
- Ten sample applications are provided -- "standard" ones are
- Goldberg's three examples, Holland's Royal Road "Challenge" problem,
- and a blind traveling salesperson problem.
-
- For portability, the user interface in the standard distribution is
- non-graphical. A number of GUIs are in development.
-
- GALOPPS Release 2.20 and manual v2.20.ps are available by FTP from
- isl.cps.msu.edu:/pub/GA/GALOPPS2.20/
-
- Contact: Erik Goodman, Genetic Algorithms Research and Applications
- Group (GARAGe), Computer Science and Case Center for Computer-Aided
- Engineering and Manufacturing, 112 Engineering Building, Michigan
- State University, East Lansing 48824. <goodman@egr.msu.edu>
-
- GANNET:
- GANNET (Genetic Algorithm / Neural NETwork) is a software package
- written by Jason Spofford in 1990 which allows one to evolve neural
- networks. It offers a variety of configuration options related to
- rates of the GENETIC OPERATORs. GANNET evolves nets based upon three
- FITNESS functions: Input/Output Accuracy, Output 'Stability', and
- Network Size.
-
- The evolved neural network presently has a binary input and binary
- output format, with neurodes that have either 2 or 4 inputs and
- weights ranging from -3 to +4. GANNET allows for up to 250 neurodes
- in a net. Research using GANNET is continuing and a new version will
- be released in late 1994 / early 1995.
-
- GANNET is available by FTP from fame.gmu.edu:/gannet/source/ There
- are separate directories for GANNET itself, a verifier program which
- verifies the best neural network generated (/gannet/verifier), and
- some sample datasets (/gannet/datasets). Further, Spofford's masters
- thesis descrribing GANNET is available in postscript format
- (/gannet/thesis).
-
- Contact: Darrell Duane or Dr. Kenneth Hintz, George Mason University,
- Dept. of Electrical & Computer Engineering, Mail Stop 1G5, 4400
- University Drive, Fairfax, VA 22033-4444 USA. Net:
- <dduane@fame.gmu.edu> or <khintz@fame.gmu.edu>
-
- GAucsd:
- GAucsd is a Genesis-based GA package incorporating numerous bug fixes
- and user interface improvements. Major additions include a wrapper
- that simplifies the writing of evaluation functions, a facility to
- distribute experiments over networks of machines, and Dynamic
- Parameter Encoding, a technique that improves GA PERFORMANCE in
- continuous SEARCH SPACEs by adaptively refining the genomic
- representation of real-valued parameters.
-
- GAucsd was written in C for Unix systems, but the central GA engine
- is easily ported to other platforms. The entire package can be ported
- to systems where implementations of the Unix utilities "make", "awk"
- and "sh" are available.
-
- GAucsd is available by FTP from cs.ucsd.edu:/pub/GAucsd/GAucsd14.sh.Z
- or from ftp.aic.nrl.navy.mil:/pub/galist/src/ga/GAucsd14.sh.Z To be
- added to a mailing list for bug reports, patches and updates, send
- "add GAucsd" to <listserv@cs.ucsd.edu>.
-
- Cognitive Computer Science Research Group, CSE Department, UCSD 0114,
- La Jolla, CA 92093-0114, USA. Net: <GAucsd-request@cs.ucsd.edu>
- GA Workbench:
- A mouse-driven interactive GA demonstration program aimed at people
- wishing to show GAs in action on simple FUNCTION OPTIMIZATIONs and to
- help newcomers understand how GAs operate. Features: problem
- functions drawn on screen using mouse, run-time plots of GA
- POPULATION distribution, peak and average FITNESS. Useful population
- STATISTICS displayed numerically, GA configuration (population size,
- GENERATION gap etc.) performed interactively with mouse.
- Requirements: MS-DOS PC, mouse, EGA/VGA display.
-
- Available by FTP from the simtel20 archive mirrors, e.g. wsmr-
- simtel20.army.mil:/pub/msdos/neurlnet/gaw110.zip or
- wuarchive.wustl.edu: or oak.oakland.edu: Produced by Mark Hughes
- <mrh@i2ltd.demon.co.uk>. A windows version is in preparation.
-
- GECO:
- GECO (Genetic Evolution through Combination of Objects) is an
- extensible, object-oriented framework for prototyping GENETIC
- ALGORITHMs in Common Lisp. GECO makes extensive use of CLOS, the
- Common Lisp Object System, to implement its functionality. The
- abstractions provided by the classes have been chosen with the intent
- both of being easily understandable to anyone familiar with the
- paradigm of genetic algorithms, and of providing the algorithm
- developer with the ability to customize all aspects of its operation.
- It comes with extensive documentation, in the form of a PostScript
- file, and some simple examples are also provided to illustrate its
- intended use.
-
- GECO Version 2.0 is available by FTP. See the file
- ftp.aic.nrl.navy.mil:/pub/galist/src/ga/GECO-v2.0.README for more
- information.
-
- George P. W. Williams, Jr., 1334 Columbus City Rd., Scottsboro, AL
- 35768. Net: <george@hsvaic.hv.boeing.com>.
-
- Genesis:
- Genesis is a generational GA system written in C by John
- Grefenstette. As the first widely available GA program Genesis has
- been very influential in stimulating the use of GAs, and several
- other GA packages are based on it. Genesis is available together with
- OOGA (see below), or by FTP from
- ftp.aic.nrl.navy.mil:/pub/galist/src/ga/genesis.tar.Z (Unverified
- 8/94).
-
- GENEsYs:
- GENEsYs is a Genesis-based GA implementation which includes
- extensions and new features for experimental purposes, such as
- SELECTION schemes like linear ranking, Boltzmann, (mu,
- lambda)-selection, and general extinctive selection variants,
- CROSSOVER operators like n-point and uniform crossover as well as
- discrete and intermediate RECOMBINATION. SELF-ADAPTATION of MUTATION
- rates is also possible.
-
- A set of objective functions is provided, including De Jong's
- functions, complicated continuous functions, a TSP-problem, binary
- functions, and a fractal function. There are also additional data-
- monitoring facilities such as recording average, variance and skew of
- OBJECT VARIABLES and MUTATION rates, or creating bitmap-dumps of the
- POPULATION.
- GENEsYs 1.0 is available via FTP from lumpi.informatik.uni-
- dortmund.de:/pub/GA/src/GENEsYs-1.0.tar.Z The documentation alone is
- available as /pub/GA/docs/GENEsYs-1.0-doc.tar.Z
-
- For more information contact: Thomas Baeck, Systems Analysis Research
- Group, LSXI, Department of Computer Science, University of Dortmund,
- D-44221 Dortmund, Germany. Net: <baeck@ls11.informatik.uni-
- dortmund.de> (Unverified 8/94).
-
- GenET:
- GenET is a "generic" GA package. It is generic in the sense that all
- problem independent mechanisms have been implemented and can be used
- regardless of application domain. Using the package forces (or
- allows, however you look at it) concentration on the problem: you
- have to suggest the best representation, and the best operators for
- such space that utilize your problem-specific knowledge. You do not
- have to think about possible GA models or their implementation.
-
- The package, in addition to allowing for fast implementation of
- applications and being a natural tool for comparing different models
- and strategies, is intended to become a depository of representations
- and operators. Currently, only floating point representation is
- implemented in the library with few operators.
-
- The algorithm provides a wide selection of models and choices. For
- example, POPULATION models range from generational GA, through
- steady-state, to (n,m)-EP and (n,n+m)-EP models (for arbitrary
- problems, not just parameter OPTIMIZATION). (Some are not finished
- at the moment). Choices include automatic adaptation of operator
- probabilities and a dynamic ranking mechanism, etc.
-
- Even though the implementation is far from optimal, it is quite
- efficient - implemented in ATT's C++ (3.0) (functional design) and
- also tested on gcc. Along with the package you will get two
- examples. They illustrate how to implement problems with
- heterogeneous and homogeneous structures, with explicit rep/opers and
- how to use the existing library (FP). Very soon I will place there
- another example - our GENOCOP operators for linearly constrained
- OPTIMIZATION. One more example soon to appear illustrates how to
- deal with complex structures and non-stationary problems - this is a
- fuzzy rule-based controller optimized using the package and some
- specific rep/operators.
-
- If you start using the package, please send evaluations (especially
- bugs) and suggestions for future versions to the author.
-
- GenET Version 1.00 is available by FTP from
- radom.umsl.edu:/var/ftp/GenET.tar.Z To learn more, you may get the
- User's Manual, available in compressed postscript in
- "/var/ftp/userMan.ps.Z". It also comes bundled with the complete
- package.
-
- Cezary Z. Janikow, Department of Math and CS, CCB319, St. Louis, MO
- 63121, USA. Net: <janikow@radom.umsl.edu>
-
- Genie:
- Genie is a GA-based modeling/forecasting system that is used for
- long-term planning. One can construct a model of an ENVIRONMENT and
- then view the forecasts of how that environment will evolve into the
- future. It is then possible to alter the future picture of the
- environment so as to construct a picture of a desired future (I will
- not enter into arguments of who is or should be responsible for
- designing a desired or better future). The GA is then employed to
- suggest changes to the existing environment so as to cause the
- desired future to come about.
-
- Genie is available free of charge via e-mail or on 3.5'' disk from:
- Lance Chambers, Department of Transport, 136 Stirling Hwy, Nedlands,
- West Australia 6007. Net: <pstamp@yarrow.wt.uwa.edu.au> It is also
- available by FTP from hiplab.newcastle.edu.au:/pub/Genie&Code.sea.Hqx
-
- Genitor:
- "Genitor is a modular GA package containing examples for floating-
- point, integer, and binary representations. Its features include many
- sequencing operators as well as subpopulation modeling.
-
- The Genitor Package has code for several order based CROSSOVER
- operators, as well as example code for doing some small TSPs to
- optimality.
-
- We are planning to release a new and improved Genitor Package this
- summer (1993), but it will mainly be additions to the current package
- that will include parallel island models, cellular GAs, delta coding,
- perhaps CHC (depending on the legal issues) and some other things we
- have found useful."
-
- Genitor is available from Colorado State University Computer Science
- Department by FTP from ftp.cs.colostate.edu:/pub/GENITOR.tar
-
- Please direct all comments and questions to
- <mathiask@cs.colostate.edu>. If these fail to work, contact: L.
- Darrell Whitley, Dept. of Computer Science, Colorado State
- University, Fort Collins, CO 80523, USA. Net:
- <whitley@cs.colostate.edu> (Unverified 8/94).
-
- GENlib:
- GENlib is a library of functions for GENETIC ALGORITHMs. Included
- are two applications of this library to the field of neural networks.
- The first one called "cosine" uses a genetic algorithm to train a
- simple three layer feed-Forward network to work as a cosine-function.
- This task is very difficult to train for a backprop algorithm while
- the genetic algorithm produces good results. The second one called
- "vartop" is developing a Neural Network to perform the XOR-function.
- This is done with two genetic algorithms, the first one develops the
- topology of the network, the second one adjusts the weights.
-
- GENlib may be obtained by FTP from ftp.neuro.informatik.uni-
- kassel.de:/pub/NeuralNets/GA-and-NN/
-
- Author: Jochen Ruhland, FG Neuronale Netzwerke / Uni Kassel,
- Heinrich-Plett-Str. 40, D-34132 Kassel, Germany.
- <jochenr@neuro.informatik.uni-kassel.de>
-
- GENOCOP:
- This is a GA-based OPTIMIZATION package that has been developed by
- Zbigniew Michalewicz and is described in detail in his book "Genetic
- Algorithms + Data Structures = Evolution Programs" (Springer Verlag,
- 2nd ed, 1994).
-
- GENOCOP (Genetic Algorithm for Numerical Optimization for COnstrained
- Problems) optimizes a function with any number of linear constraints
- (equalities and inequalities).
-
- The second version of the system is available by FTP from
- unccsun.uncc.edu:/coe/evol/genocop2.tar.Z
-
- Zbigniew Michalewicz, Dept. of Computer Science, University of North
- Carolina, Chappel-Hill, NC, USA. Net: <zbyszek@uncc.edu>
-
- GIGA:
- GIGA is designed to propogate information through a POPULATION, using
- CROSSOVER as its operator. A discussion of how it propogates BUILDING
- BLOCKs, similar to those found in Royal Road functions by John
- Holland, is given in the DECEPTION section of: "Genetic Invariance: A
- New Paradigm for Genetic Algorithm Design." University of Alberta
- Technical Report TR92-02, June 1992. See also: "GIGA Program
- Description and Operation" University of Alberta Computing Science
- Technical Report TR92-06, June 1992
-
- These can be obtained, along with the program, by FTP from
- ftp.cs.ualberta.ca:/pub/TechReports/ in the subdirectories TR92-02/
- and TR92-06/ .
-
- Also, the paper "Mutation-Crossover Isomorphisms and the Construction
- of Discriminating Functions" gives a more in-depth look at the
- behavior of GIGA. Its is available from
- ftp.cs.ualberta.ca:/pub/joe/Preprints/xoveriso.ps.Z
-
- Joe Culberson, Department of Computer Science, University of Alberta,
- CA. Net: <joe@cs.ualberta.ca>
-
- LibGA:
- LibGA is a library of routines written in C for developing GENETIC
- ALGORITHMs. It is fairly simple to use, with many knobs to turn.
- Most GA parameters can be set or changed via a configuration file,
- with no need to recompile. (E.g., operators, pool size and even the
- data type used in the CHROMOSOME can be changed in the configuration
- file.) Function pointers are used for the GENETIC OPERATORs, so they
- can easily be manipulated on the fly. Several genetic operators are
- supplied and it is easy to add more. LibGA runs on many
- systems/architectures. These include Unix, DOS, NeXT, and Amiga.
-
- LibGA Version 1.00 is available by FTP from
- ftp.aic.nrl.navy.mil:/pub/galist/src/ga/libga100.tar.Z or by email
- request to its author, Art Corcoran <corcoran@penguin.mcs.utulsa.edu>
- (Unverified 8/94).
-
- LICE:
- LICE is a parameter OPTIMIZATION program based on EVOLUTION
- STRATEGIEs (ES). In contrast to classic ES, LICE has a local
- SELECTION scheme to prevent premature stagnation. Details and results
- were presented at the EP'94 conference in San Diego. LICE is written
- in ANSI-C (more or less), and has been tested on Sparc-stations and
- Linux-PCs. If you want plots and graphics, you need X11 and gnuplot.
- If you want a nice user interface to create parameter files, you also
- need Tk/Tcl.
-
- LICE-1.0 is available as source code by FTP from
- lumpi.informatik.uni-dortmund.de:/pub/ES/src/LICE-1.0.tar.gz
-
- Author: Joachim Sprave <joe@ls11.informatik.uni-dortmund.de>
-
- mGA:
- mGA is an implementation of a messy GA as described in TCGA report
- No. 90004. Messy GAs overcome the linkage problem of simple GENETIC
- ALGORITHMs by combining variable-length strings, GENE expression,
- messy operators, and a nonhomogeneous phasing of evolutionary
- processing. Results on a number of difficult deceptive test
- functions have been encouraging with the messy GA always finding
- global optima in a polynomial number of function evaluations.
-
- See TCGA reports 89003, 90005, 90006, and 91004, and IlliGAL report
- 91008 for more information on messy GAs (See Q14). The C language
- version is available by FTP from IlliGAL in the directory
- gal4.ge.uiuc.edu:/pub/src/messyGA/C/
-
- PARAGenesis:
- PARAGenesis is the result of a project implementing Genesis on the
- CM-200 in C*. It is an attempt to improve PERFORMANCE as much as
- possible without changing the behavior of the GENETIC ALGORITHM.
- Unlike the punctuated equilibria and local SELECTION models,
- PARAGenesis doesn't modify the genetic algorithm to be more
- parallelizable as these modifications can drastically alter the
- behavior of the algorithm. Instead each member is placed on a
- separate processor allowing initialization, evaluation and MUTATION
- to be completely parallel. The costs of global control and
- communication in selection and CROSSOVER are present but minimized as
- much as possible. In general PARAGenesis on an 8k CM-200 seems to run
- 10-100 times faster than Genesis on a Sparc 2 and finds equivalent
- solutions.
-
- PARAGenesis includes all the features of serial Genesis plus some
- additions. The additions include the ability to collect timing
- STATISTICS, probabilistic SELECTION (as opposed to Baker's stochastic
- universal sampling), uniform CROSSOVER and local or neighborhood
- SELECTION. Anyone familiar with the serial implementation of Genesis
- and C* should have little problem using PARAGenesis.
-
- PARAGenesis is available by FTP from
- ftp.aic.nrl.navy.mil:/pub/galist/src/ga/paragenesis.tar.Z
-
- DISCLAIMER: PARAGenesis is fairly untested at this point and may
- contain some bugs.
-
- Michael van Lent, Advanced Technology Lab, University of Michigan,
- 1101 Beal Av., Ann Arbor, MI 48109, USA. Net:
- <vanlent@eecs.umich.edu>.
-
- PGA:
- PGA is a simple testbed for basic explorations in GENETIC ALGORITHMs.
- Command line arguments control a range of parameters, there are a
- number of built-in problems for the GA to solve. The current set
- includes:
-
- o maximize the number of bits set in a CHROMOSOME
-
- o De Jong's functions DJ1, DJ2, DJ3, DJ5
-
- o binary F6, used by Schaffer et al
-
- o a crude 1-d knapsack problem; you specify a target and a set of
- numbers in an external file, GA tries to find a subset that sums
- as closely as possible to the target
-
- o the `royal road' function(s); a CHROMOSOME is regarded as a set of
- consecutive blocks of size K, and scores K for each block entirely
- filled with 1s, etc; a range of parameters.
-
- o max contiguous bits, you choose the ALLELE range.
-
- o timetabling, with various smart MUTATION options; capable of
- solving a good many real-world timetabling problems (has done so)
-
- Lots of GA options: rank, roulette, tournament, marriage-tournament,
- spatially-structured SELECTION; one-point, two-point, uniform or no
- CROSSOVER; fixed or adaptive MUTATION; one child or two; etc.
-
- Default output is curses-based, with optional output to file; can be
- run non-interactively too for batched series of experiments.
-
- It's easy to add your own problems. CHROMOSOMEs are represented as
- character arrays, so you are not (quite) stuck with bit-string
- problem encodings.
-
- PGA has been used for teaching for a couple of years now, and has
- been used as a starting point by a fair number of people for their
- own projects. So it's reasonably reliable. However, if you find bugs,
- or have useful contributions to make, Tell Me! It is available by FTP
- from ftp.dai.ed.ac.uk:pub/pga-2.7/pga-2.7.tar.Z (see the file
- pga.README in the same directory for more information)
-
- Peter Ross, Department of AI, University of Edinburgh, 80 South
- Bridge, Edinburgh EH1 1HN, UK. Net: <peter@aisb.ed.ac.uk>
-
- SGA-C, SGA-Cube:
- SGA-C is a C-language translation and extension of the original
- Pascal SGA code presented in Goldberg's book [GOLD89]. It has some
- additional features, but its operation is essentially the same as
- that of the Pascal version. SGA-C is described in TCGA report No.
- 91002.
-
- SGA-Cube is a C-language translation of Goldberg's SGA code with
- modifications to allow execution on the nCUBE 2 Hypercube Parallel
- Computer. When run on the nCUBE 2, SGA-Cube can take advantage of
- the hypercube architecture, and is scalable to any hypercube
- dimension. The hypercube implementation is modular, so that the
- algorithm for exploiting parallel processors can be easily modified.
-
- In addition to its parallel capabilities, SGA-Cube can be compiled on
- various serial computers via compile-time options. In fact, when
- compiled on a serial computer, SGA-Cube is essentially identical to
- SGA-C. SGA-Cube is described in TCGA report No. 91005.
-
- Each of these programs is distributed in the form of a Unix shar
- file, available via e-mail or on various formatted media by request
- from: Robert Elliott Smith, Department of Engineering of Mechanics,
- Room 210 Hardaway Hall,, The University of Alabama P.O. Box 870278,
- Tuscaloosa, Alabama 35487, USA. Net: <rob@comec4.mh.ua.edu>
-
- SGA-C and SGA-Cube are also available in compressed tar form by FTP
- from ftp.aic.nrl.navy.mil:/pub/galist/src/ga/sga-c.tar.Z and sga-
- cube.tar.Z .
-
- Splicer:
- Splicer is a GENETIC ALGORITHM tool created by the Software
- Technology Branch (STB) of the Information Systems Directorate at
- NASA/Johnson Space Center with support from the MITRE Corporation.
- Splicer has well-defined interfaces between a GA kernel,
- representation libraries, FITNESS modules, and user interface
- libraries.
-
- The representation libraries contain functions for defining,
- creating, and decoding genetic strings, as well as multiple CROSSOVER
- and MUTATION operators. Libraries supporting binary strings and
- permutations are provided, others can be created by the user.
-
- FITNESS modules are typically written by the user, although some
- sample applications are provided. The modules may contain a fitness
- function, initial values for various control parameters, and a
- function which graphically displays the best solutions.
-
- Splicer provides event-driven graphic user interface libraries for
- the Macintosh and the X11 window system (using the HP widget set); a
- menu-driven ASCII interface is also available though not fully
- supported. The extensive documentation includes a reference manual
- and a user's manual; an architecture manual and the advanced
- programmer's manual are currently being written.
-
- An electronic bulletin board (300/1200/2400 baud, 8N1) with
- information regarding Splicer can be reached at (713) 280-3896 or
- (713) 280-3892. Splicer is available free to NASA and its
- contractors for use on government projects by calling the STB Help
- Desk weekdays 9am-4pm CST at (713) 280-2233. Government contractors
- should have their contract monitor call the STB Help Desk; others may
- purchase Splicer for $221 (incl. documentation) from: COSMIC, 382 E.
- Broad St., Athens, GA 30602, USA. (Unverified 8/94). Last known
- address <bayer@galileo.jsc.nasa.gov> (Steve Bayer). This now bounces
- back with "user unknown".
-
- TOLKIEN:
- TOLKIEN (TOoLKIt for gENetics-based applications) is a C++ class
- library, intended for those involved in GAs and CLASSIFIER SYSTEM
- research with a working knowledge of C++. It is designed to reduce
- effort in developing genetics-based applications by providing a
- collection of reusable objects. For portability, no compiler
- specific or class library specific features are used. The current
- version has been compiled successfully using Borland C++ Version 3.1
- and GNU C++.
-
- TOLKIEN contains a lot of useful extensions to the generic GENETIC
- ALGORITHM and CLASSIFIER SYSTEM architecture. Examples include: (i)
- CHROMOSOMEs of user-definable types; binary, character, integer and
- floating point; (ii) Gray code encoding and decoding; (iii) multi-
- point and uniform CROSSOVER; (iv) diploidy and dominance; (v) various
- SELECTION schemes such as tournament selection and linear ranking;
- (vi) linear FITNESS scaling and sigma truncation; (vii) the simplest
- one-taxon-one-action classifiers and the general two-taxa-one-action
- classifiers.
-
- TOLKIEN is available from ENCORE (See Q15.3) in file:
- GA/src/TOLKIEN.tar.gz The documentation and two primers on how to
- build GA and CFS applications alone are available as:
- GA/docs/tolkien-doc.tar.gz
-
- Author: Anthony Yiu-Cheung Tang <tang028@cs.cuhk.hk>, Department of
- Computer Science (Rm 913), The Chinese University of Hong Kong. Tel:
- 609-8403, 609-8404.
-
- WOLF:
- This is a simulator for the G/SPLINES (genetic spline models)
- algorithm which builds spline-based functional models of experimental
- data, using CROSSOVER and MUTATION to evolve a POPULATION towards a
- better fit. It is derived from Friedman's MARS models. The original
- work was presented at ICGA-4, and further results including
- additional basis function types such as B-splines have been presented
- at the NIPS-91 meeting.
-
- Available free by FTP by contacting the author; runs on SUN (and
- possibly any SYSV) UNIX box. Can be redistributed for noncommercial
- use. Simulator includes executable and C source code; a technical
- report (RIACS tech report 91.10) is also available.
-
- David Rogers, MS Ellis, NASA Ames Research Center, Moffett Field, CA
- 94035, USA. Net: <drogers@msi.com>
-
- CLASSIFIER SYSTEMS
- CFS-C:
- CFS-C 1.0 is a domain independent collection of CLASSIFIER SYSTEM
- routines written by Rick L. Riolo as part of his PhD dissertation. A
- completely rewritten CFS-C is planned for 1994/95; this may include
- the features of CFS-C 2.0 mentioned in [SAB90] (e.g. "latent
- learning") or they may be included in a separate package released in
- 1995. An ANSIfied version of CFS-C 1.0 (CFS-C 1.98j) is available by
- FTP.
-
- CFS-C is available from ENCORE (See Q15.3) in file:
- CFS/src/cfsc-1.98j.tar.gz and includes the original 1.02 CFS-C in
- it's "cfsc/orig" folder after unpacking. On the "SyS" FTP server
- it's: lumpi.informatik.uni-dortmund.de:/pub/LCS/src/cfsc-1.98j.tar.gz
- with documentation in /pub/LCS/docs/cfsc.ps.gz
-
- Another version of CFS-C (version XV 0.1) by Jens Engel
- <engel@asterix.irb.uni-hannover.de> is also available. This includes
- bug fixes of earlier versions, allowing it to run on a wider range of
- machines (e.g. Linux and nCUBE). It also has an XView front end that
- makes it easier to control, and some extensions to the algorithms.
- It is available from ENCORE in file: CFS/src/cfscxv-0.1.tar.gz with
- documentation in CFS/docs/cfscxv-0.1.readme.gz
-
- References
-
- Rick L. Riolo (1988) "CFS-C: A package of domain independent
- subroutines for implementing classifier systems in arbitrary, user-
- defined environments", Logic of computers group, Division of computer
- science and engineering, University of Michigan.
-
- Rick L. Riolo (1988) "LETSEQ: An implementation of the CFS-C
- classifier-system in a task-domain that involves learning to predict
- letter sequences", Logic of computers group, Division of computer
- science and engineering, University of Michigan.
-
- Rick L. Riolo (1988) "CFS-C/FSW1: An implementation of the CFS-C
- classifier system in a task domain that involves learning to traverse
- a finite state world", Logic of computers group, Division of computer
- science and engineering, University of Michigan.
-
- SCS-C:
- SCS-C is a (`mostly ANSI') C language translation and extension of
- Goldberg's Simple CLASSIFIER SYSTEM, as presented in Appendix D in
- his seminal book [GOLD89].
-
- SCS-C has been developed in parallel on a Sun 10/40 and an ATARI ST,
- and thus should be quite portable; it's distributed free of charge
- under the terms of the GNU General Public License. Included are some
- additional goodies, e.g. the VAX/VMS version of SCS, rewritten in C
- by Erik Mayer <emayer@uoft02.utoledo.edu>.
-
- SCS-C v1.0j is available from ENCORE (See Q15.3), by FTP in file
- EC/CFS/src/scsc-1.0j.tar.gz
-
- For more information contact: Joerg Heitkoetter, EUnet Deutschland
- GmbH, Techo-Park, Emil-Figge-Str. 80, D-44227 Dortmund, Germany.
- Net: <joke@Germany.EU.net>.
-
- ------------------------------
-
- Subject: Q20.2: Commercial software packages?
-
- EnGENEer:
- Logica Cambridge Ltd. developed EnGENEer as an in-house GENETIC
- ALGORITHM environment to assist the development of GA applications on
- a wide range of domains. The software was written in C and runs under
- Unix as part of a consultancy and systems package. It supports both
- interactive (X-Windows) and batch (command-line) modes of operation.
-
- EnGENEer provides a number of flexible mechanisms which allow the
- developer to rapidly bring the power of GAs to bear on new problem
- domains. Starting with the Genetic Description Language, the
- developer can describe, at high level, the structure of the ``genetic
- material'' used. The language supports discrete GENEs with user
- defined cardinality and includes features such as multiple
- CHROMOSOMEs models, multiple SPECIES models and non-evolvable parsing
- symbols which can be used for decoding complex genetic material.
-
- The user also has available a descriptive high level language, the
- Evolutionary Model Language. It allows the description of the GA type
- used in terms of configurable options including: POPULATION size,
- population structure and source, SELECTION method, CROSSOVER and
- MUTATION type and probability, INVERSION, dispersal method, and
- number of OFFSPRING per GENERATION.
-
- Both the Genetic Description Language and the Evolutionary Model
- Language are fully supported within the interactive interface
- (including online help system) and can be defined either "on the fly"
- or loaded from audit files which are automatically created during a
- GA run.
-
- Monitoring of GA progress is provided via both graphical tools and
- automatic storage of results (at user defined intervals). This allows
- the user to restart EnGENEer from any point in a run, by loading both
- the POPULATION at that time and the evolutionary model that was being
- used.
-
- Connecting EnGENEer to different problem domains is achieved by
- specifying the name of the program used to evaluate the problem
- specific FITNESS function and constructing a simple parsing routine
- to interpret the genetic material. A library of standard
- interpretation routines are also provided for commonly used
- representation schemes such as gray-coding, permutations, etc. The
- fitness evaluation can then be run as either a slave process to the
- GA or via a standard handshaking routines. Better still, it can be
- run on either the machine hosting the EnGENEer or on any sequential
- or parallel hardware capable of connecting to a Unix machine.
-
- For more information, contact: George Robbins, Systems Intelligence
- Division, Logica Cambridge Ltd., Betjeman House, 104 Hills Road,
- Cambridge CB2 1LQ, UK. Tel: +44 716 379111, Fax: +44 223 322315
- (Unverified 8/94).
-
- EvoFrame:
- EvoFrame is to EVOLUTION STRATEGIEs what MicroGA is to GENETIC
- ALGORITHMs, a toolkit for application development incorporating ESs
- as the OPTIMIZATION engine.
-
- EvoFrame is an object oriented implemented programming tool for
- EVOLUTION STRATEGIEs (Rechenberg/Schwefel, Germany) for easy
- implementation and solution of numerical and combinatorical problems.
- EvoFrame gives you freedom of implementing every byte of the
- OPTIMIZATION principle and its user interface. You can focus on the
- optimization problem and forget about all the rest.
-
- EvoFrame is available as Version 2.0 in Borland-Pascal 7.0 and Turbo-
- Vision for PC's and as Version 1.0 in C++ for Apple Macintosh using
- MPW and MacApp. Both implementations allow full typed
- implementation, i.e. no more translation from problem specific
- format to an OPTIMIZATION specific one. A prototyping tool (cf
- REALizer) exists for both platforms too.
-
- EvoFrame allows pseudoparallel OPTIMIZATION of many problems at once
- and you can switch optimization parameters and internal methods (i.e.
- quality function etc.) during runtime and during optimization cycle.
- Both tools can be modified or extended by overloading existing
- methods for experimental use. They are developed continously in
- correlation to new research results.
-
- The PC version is prepared for experimental use due to a
- comprehensive protocolling mechanism of optimzation cycles and user
- data. It also allows compilation of executable files with different
- complexity by setting conditional compilation flags. It can be used
- with 3 levels of stacked POPULATIONs.
-
- The Mac version is the more complex (recursive) implementation. It
- allows stacking of any number of POPULATIONs for modelling of complex
- systems. Theory stops at multipopulation level at the time. EvoFrame
- for Mac is ready for the future, allowing any number of population
- levels.
-
- Ask for porting the Mac version (C++) to any other platform, i.e. X
- Windows.
-
- REALizer is a tool for rapid prototyping of EvoFrame applications.
- It's an override of the corresponding framework which is prepared to
- optimize using a vector of real numbers. All methods for standard
- EVOLUTION and file handling, etc. are ready implemented. The
- remaining work for the user is to define a constant for the problem
- size, fill in the quality function and start the OPTIMIZATION
- process.
-
- For further information, current prices and orders, contact: Wolfram
- Stebel, Optimum Software, Braunfelser Str. 26, 35578 Wetzlar,
- Germany. Net: <optimum@applelink.apple.com>
-
- Evolver:
- Evolver is a spreadsheet add-in which incorporates "the first
- commercially available GENETIC ALGORITHM to search for solutions".
- Evolver can be customized through a macro language, and is available
- for $345 on 3.5'' or 5.25'' floppies for the Excel, WingZ and Resolve
- spreadsheets on the Mac and PC computers. For further information,
- contact: Axcelis, Inc., 4668 Eastern Avenue North, Seattle, WA
- 98103-6932, USA. Tel: (206) 632-0885.
-
- To order Evolver, contact: Spreadware Distributors, P.O. Box 4552,
- Palm Desert, CA 92261, USA. Tel: (619) 347-2365, Fax: (619) 347-6045
- (Unverified 8/94).
-
- GAME:
- GAME (GA Manipulation Environment) aims to demonstrate GA
- applications and build a suitable programming ENVIRONMENT.
-
- GAME is being developed as part of the PAPAGENA project of the
- European Community's Esprit III initiative.
-
- GAME is available as an addendum to a book on PGAs (cf PAPAGENA,
- Q20.3). And from the project's FTP server
- bells.cs.ucl.ac.uk:/papagena/ e.g. "papagena/game/docs" contains all
- the papers that have been produced over the course of the GAME
- project, e.g. you'll find a little bit outdated draft of the GAME
- DESIGN NOTES document, which explains some of the details of the
- implementation. There are some other technical reports also. The
- sources can also be obtained by FTP see papagena/game/version2.01/
-
- GAME is now in version 2.01 (the version distributed with the book
- was 1.0). This version is still able to run only sequential GAs, but
- version 3.0 is coming soon and will handle parallel GAs as well.
-
- Unfortunately, The project yet only produced a Borland C++ 3.x
- version, so far. It is intended to distribute a version for UNIX/GNU
- C++ as well, when some compatibility issues concerning C++
- "standards" have been resolved. Afterward a UNIX version will be
- released, but this will be only happen after the release of PC
- version 3.0.
-
- Please, feel free to use and distribute the software.
-
- For more information contact: Jose Luiz Ribeiro Filho, Department of
- Computer Science, University College London, Gower Street, London
- WC1E 6BT, UK. Net: <zeluiz@cs.ucl.ac.uk> (Unverified 8/94).
-
- MicroGA:
- MicroGA is a powerful and flexible new tool which allows programmers
- to integrate GAs into their software quickly and easily. It is an
- object-oriented C++ framework that comes with full source code and
- documentation as well as three sample applications. Also included is
- the Galapagos code generator which allows users to create complete
- applications interactively without writing any C++ code, and a sample
- MacApp interface.
-
- MicroGA is available for Macintosh II or higher with MPW and a C++
- compiler, and also in a Microsoft Windows version for PC compatibles.
- Compiled applications made with MicroGA can be sold without license
- fee. MicroGA is priced at $249.
-
- Galapagos is a tool for use with Emergent Behavior's MicroGA Toolkit.
- It allows a user to define a function and set of constraints for a
- problem that the user wants to solve using the GA. Galapagos then
- generates a complete C++ program using the information supplied. Then
- all the user has to do is to compile these files, using either
- Turbo/Borland C++ (PC, MS Windows), or MPW and C++ compiler
- (Macintosh), and link the resulting code to the MicroGA library. Then
- just run the program. Galapagos comes free with every copy of
- MicroGA.
-
- For further information and orders, contact: Steve Wilson, Emergent
- Behavior, 635 Wellsbury Way, Palo Alto, CA 94306, USA. Net:
- <emergent@aol.com>
-
- MicroGA is distributed in Germany by Optimum Software (cf EvoFrame &
- REALizer entries).
-
- Omega:
- The Omega Predictive Modeling System, marketed by KiQ Limited, is a
- powerful approach to developing predictive models. It exploits
- advanced GA techniques to create a tool which is "flexible, powerful,
- informative and straightforward to use". Omega is geared to the
- financial domain, with applications in Direct Marketing, Insurance,
- Investigations and Credit Management. The ENVIRONMENT offers
- facilities for automatic handling of data; business, statistical or
- custom measures of PERFORMANCE, simple and complex profit modeling,
- validation sample tests, advanced confidence tests, real time
- graphics, and optional control over the internal GA.
-
- For further information, contact: KiQ, Business Modeling Systems
- Ltd., Easton Hall, Great Easton, Essex CM6 2HD, UK. Tel: +44 371
- 870254 (Unverified 8/94).
-
- OOGA:
- OOGA (Object-Oriented GA) is a GENETIC ALGORITHM designed for
- industrial use. It includes examples accompanying the tutorial in
- the companion "Handbook of Genetic Algorithms". OOGA is designed such
- that each of the techniques employed by a GA is an object that may be
- modified, displayed or replaced in object-oriented fashion. OOGA is
- especially well-suited for individuals wishing to modify the basic GA
- techniques or tailor them to new domains.
-
- The buyer of OOGA also receives Genesis (see above). This release
- sports an improved user interface. OOGA and Genesis are available
- together on 3.5'' or 5.25'' disk for $60 ($52.50 inside North
- America) by order from: The Software Partnership (T.S.P.), P.O. Box
- 991, Melrose, MA 02176, USA. Tel: +1 617 662 8991 (Unverified 8/94).
-
- PC-Beagle:
- PC-Beagle is a rule-finder program for PCs which examines a database
- of examples and uses machine-learning techniques to create a set of
- decision rules for classifying those examples, thus turning data into
- knowledge. The system contains six major components, one of which
- (HERB - the "Heuristic Evolutionary Rule Breeder") uses GA techniques
- to generate rules by natural SELECTION.
- PC-Beagle is available to educational users for 69 pounds sterling.
- Orders, payment or requests for information should be addressed to:
- Richard Forsyth, Pathway Research Ltd., 59 Cranbrook Rd., Bristol BS6
- 7BS, UK. Tel: +44 272 428692 (Unverified 8/94).
-
- XpertRule GenAsys:
- XpertRule GenAsys is an expert system shell with embedded GENETIC
- ALGORITHM marketed by Attar Software. Targeted to solve scheduling
- and design applications, this system combines the power of genetic
- algorithms in evolving solutions with the power of rule-based
- programming in analyzing the effectiveness of solutions. Rule-based
- programming can also be used to generate the initial POPULATION for
- the genetic algorithm and for post-optimization planning. Some
- examples of design and scheduling problems which can be solved by
- this system include: OPTIMIZATION of design parameters in electronic
- and avionic industries, route optimization in the distribution
- sector, production scheduling in manufacturing, etc.
-
- For further information, contact: Attar Software, Newlands Road,
- Leigh, Lancashire, UK. Tel: +44 942 608844. (Unverified 8/94).
- Last known address <100166.1547@CompuServe.com>. This now bounces
- back with "user unknown".
-
-
- XYpe:
- XYpe (The GA Engine) is a commercial GA application and development
- package for the Apple Macintosh. Its standard user interface allows
- you to design CHROMOSOMEs, set attributes of the genetic engine and
- graphically display its progress. The development package provides a
- set of Think C libraries and include files for the design of new GA
- applications. XYpe supports adaptive operator weights and mixtures of
- alpha, binary, gray, ordering and real number codings.
-
- The price of $725 (in Massachusetts add 5% sales tax) plus $15
- shipping and handling includes technical support and three
- documentation manuals. XYpe requires a Macintosh SE or newer with
- 2MB RAM running OS V6.0.4 or greater, and Think C if using the
- development package.
-
- Currently the GA engine is working; the user interface will be
- completed on demand. Interested parties should contact: Ed Swartz,
- Virtual Image, Inc., 75 Sandy Pond Road #11, Ayer, MA 01432, USA.
- Tel: +1 (508) 772-4225 (Unverified 8/94).
-
- ------------------------------
-
- Subject: Q20.3: Current research projects?
-
- PAPAGENA:
- The European ESPRIT III project PAPAGENA is pleased to announce the
- availability of the following book and software:
-
- Parallel Genetic Algorithms: Theory and Applications was recently
- published by IOS press. The book, edited by Joachim Stender, provides
- an overview of the theoretical, as well as practical, aspects
- involved in the study and implementation of parallel GENETIC
- ALGORITHMs (PGAs).
-
- The book comes with a floppy disk version of GAME (Genetic Algorithm
- Manipulation Environment). For more information see the section on
- GAME in Q20.2.
-
- PeGAsuS:
- PeGAsuS is a general programming environment for evolutionary
- algorithms. developed at the German National Research Center for
- Computer Science. Written in ANSI-C, it runs on MIMD parallel
- machines, such as transputers, and distributed systems, as well as
- serial machines.
-
- The Library contains GENETIC OPERATORs, a collection of FITNESS
- functions, and input/output and control procedures. It provides the
- user with a number of validated modules. Currently, PeGAsuS can be
- compiled with the GNU C, RS/6000 C, ACE-C, and Alliant's FX/2800 C
- compilers. It runs on SUNs and RS/6000 workstations, as well as on
- the Alliant FX/28. PeGAsuS is not available to the public.
-
- For more information contact: Dirk Schlierkamp-Voosen, Research Group
- for Adative Systems, German National Research Center for Computer
- Science, 53731 Sankt Augustin, Germany. Net: <dirk.schlierkamp-
- voosen@gmd.de>
-
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