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Text File | 1993-02-18 | 17KB | 311 lines

PileUp of: @Grupouno.Seqs Symbol comparison table: GenRunData:PileUpDNA.Cmp CompCheck: 6876 GapWeight: 5.0 GapLengthWeight: 0.3 Pileup.Msf MSF: 2437 Type: N February 18, 1993 12:36 Check: 338 .. Name: Bpobgla Len: 2437 Check: 6941 Weight: 1.00 Name: Bpobglb Len: 2437 Check: 3028 Weight: 1.00 Name: Cdcbgla Len: 2437 Check: 6915 Weight: 1.00 Name: Ssobeta Len: 2437 Check: 3454 Weight: 1.00 // 1 50 Bpobgla .......... .......... .......... .......... .......... Bpobglb .......... ....GGATCC TGTAGCGTTA CGCAAGGGTC TGCGTTTGGA Cdcbgla .......... .......... .......... .......... .......... Ssobeta AAGGAGAAAC TTGGCAGTTT ATAACTTGAC AGTAGGTTGT GGAGTGATGA 51 100 Bpobgla .......... .......... .......... .......... .......... Bpobglb GAATTTCATG GATGCTTGGG ATAAAGGGAA TTTCTCTCAA TATATGTGGA Cdcbgla .......... .......... .......... .......... .......... Ssobeta CTGGATCAAT ACTAGGAGGA GTAGCATATA ATTACGTTAC ACAATTTTAT 101 150 Bpobgla .......... .......... .......... .......... .......... Bpobglb ACAGTATTTT GTATACAGGA GTTTCTACGT TATTAACCCT GATTATATCC Cdcbgla .......... .......... .......... .......... .......... Ssobeta AACCCAATAT ATTCAATAGA CCTTATGCTT ATCCTATCCT CTATTCTAAG 151 200 Bpobgla .......... .......... .......GAT CATGGTGGCG GGCATACCGG Bpobglb GTGTTTGCCG CCTTTCCGCT AGCACGGGGA TATGTTAAGT TCAGCACCTT Cdcbgla .......... .......... .......... .......... .......... Ssobeta ATTCTCGGTA TCTCCCCTAT TCTTGACCAT AAAAGATACT CGCTCAAAGC 201 250 Bpobgla GTGGAGCTGT GCCTGGTTGA TTAACCTGTA CGCCCGGCTG GAAGATGGCG Bpobglb CTTTTATGTG TTTTTCCTGA TTTCCATGTA TCTCCCCAAT CCGCTAATCC Cdcbgla .......... .......... .......... .......... .......... Ssobeta TTAAATAATA TTAATCATAA ATAAAGTCAT GTACTCATTT CCAAATAGCT 251 300 Bpobgla ACACTGCGCA TCGGTA..TG TTCGCACGTT GCTGTCGCGG TCGATCTACC Bpobglb GCAATTTGCC TTATTAATAG CTGGGACTGT ACATACCAGC TTGGTTTATT Cdcbgla .......... .......... .......... .......... .......... Ssobeta TTAGGTTTGG TTGGTCCCAG GCCGGATTTC AATCAGAAAT GGGAACACCA 301 350 Bpobgla CTAATTTATT CGACGCTCAC CCGC...... ..CTTTTCAG ATCGACGGTA Bpobglb TGCTGAAAAA CGACAGGTAC CGGCATCGCT TTCCTGATGT TTGTGGGGTA Cdcbgla .......... .......... .......... .......... .......... Ssobeta GGGTCAGAAG ATCCAAATAC TGACTGGTAT AAATGGGTTC ATGATCCAGA 351 400 Bpobgla ACTTTGGTGC GACGGCAGGC ATAGCAGAAA TGCTGCTGCA A.AGCCGCCC Bpobglb TATCAAGTCT GTCTCCCGAG AGCTGGATGA AGCGGCTGCA ATGGACGGAT Cdcbgla .......... .......... .......... .......... .......... Ssobeta AAACATGGCA GCGGGATTAG TAAGTGGAGA TCTACCAGAA AATGGGCCAG 401 450 Bpobgla GGGCGAGCTG ACGCTATTGC CTGCCCTGCC ATCGGCATGG CCGGAGGGAC Bpobglb GCGGTTATTC ACGTTATTTG TTCACGATTC TTGTACCACT GATGAAGCCC Cdcbgla .......... .......... .......... .......... .......... Ssobeta GCTACTGGGG AAACTATAAG ACATTTCACG ATAATGCACA AAAAATGGGA 451 500 Bpobgla GGGTCAGCGG CTTGAAAGGG CGTGGCGGAA TT......AC GGTCAGCATG Bpobglb GTGTTGGCGA CAGGCATCAT TTTGACAGCC ATTGGTGCAT GGAACGACAT Cdcbgla .......... .......... .......... .......... .......... Ssobeta TTAAAAATAG CTAGACTAAA TGTGGAATGG TCTAGGATAT TTCCTAATCC 501 550 Bpobgla GAATGGTCCG GTTCGCGGCT CGTCCGTGCG GACGTTACCA CATCGGTCCA Bpobglb TATAGGTCCT ACCATTTATT TGTCTGATCC CGCCTATCAG CCAGTGACCA Cdcbgla .......... .......... .......... .......... .......... Ssobeta ATTACCAAGG CCACAAAACT TTGATGAATC AAAACAAGAT GTGACAGAGG 551 600 Bpobgla ...GACGGGA AGCTGTACGA TTCGCAGTGC ACATCCGTTT AGCGTTGATG Bpobglb AGGGACTGTT CTCTTTCTAT GGACAATACA TGAACAACTG GCCGCTGCTT Cdcbgla .......... .......... .......... .......... .......... Ssobeta TTGAGATAAA CGAAAACGAG TTAAAGAGAC TTGACGAGTA CGCTAATAAA 601 650 Bpobgla ATCGTCGGGC TCAGCCTGAT CCCAAGCACG GAGGATTTAT TTTGTCATGG Bpobglb GCTTGCGGTA TCTTGATTGT TACACTACCG CTGGTTATTT TGTATATTTT Cdcbgla .......... .......... .......... .......... .......... Ssobeta GACGCATTAA ACCATTACAG GGAAATATTC AAGGATCTTA AAAGTAGAGG 651 700 Bpobgla ACTTTTACCA AAAAGCAGGA AACAACGAAT GAATATACGA TTATAATTGA Bpobglb CCTCCAGCGC TTTATTGTCG GCGGTGCAAT GGCTGGAGCT GTGAAGTCTT Cdcbgla .......... .......... .......... .......... .......... Ssobeta ACTTTACTTT ATACTAAACA TGTATCATTG GCCATTACCT CTATGGTTAC 701 750 Bpobgla GGGAGAGGAA GAGAC..... ........AC AATGACTATT TTTCAATTTC Bpobglb GATTCCTGAA AGGACGGTAC CGAGTATGAG CGAGAATACC TTTATATTTC Cdcbgla ......AAGC TTTATTATCC TTAAAAGGAG GTTTATGGAC ATGAGTTTCC Ssobeta ACGACCCAAT AAGAGTAAGA AGAGGAGATT TTACTGGACC AAGTGGTTGG 751 800 Bpobgla CGCAGGACTT TA....TGTG GGGTACCGCA ACGGCCGCCT ACCAAATCGA Bpobglb CTGCCACGTT TA....TGTG GGGAACTTCA ACCTCTTCTT ATCAAATTGA Cdcbgla CAAAAGGATT TT....TGTG GGGTGCTGCA ACTGCGTCAT ATCAGATTGA Ssobeta CTAAGTACTA GAACAGTTTA CGAATTCGCT AGATTCTCAG CTTATATAGC 801 850 Bpobgla GGGGGCTTAC CAGGAGGATG GAAGAGGGTT GTCGATCTGG GATACCTTTG Bpobglb AGGGGGTACA GATGAGGGCG GCAGAACGCC CTCCATTTGG GATACTTTTT Cdcbgla AGGTGCATGG AACGAAGATG GAAAAGGCGA ATCTATTTGG GACAGGTTCA Ssobeta TTGGAAATTC GATGATCTAG TGGATGAGTA CTCAACAATG AATGAACCTA 851 900 Bpobgla CCCATACGCC TGGCAAAGTG TTCAACGGTG ACAACGGCAA TGTAGCTTGT Bpobglb GTCAAATCCC CGGGAAGGTA ATCGGAGGGG ACTGTGGAGA TGTAGCATGT Cdcbgla CACATCAAAA AAGAAATATT CTATACGGTC ATAATGGCGA TGTTGCCTGC Ssobeta ACGTTGTTGG AGGTTTAGGA TACGTTGGTG TTAAGTCCGG TTTTCCCCCA 901 950 Bpobgla GACAGCTATC ATCGTTACGA AGAAGATATC CGTCTCATGA AGGAACTGGG Bpobglb GATCATTTTC ACCACTTTAA AGAAGACGTG CAATTAATGA AACAGCTTGG Cdcbgla GACCATTACC ACAGGTTCGA AGAAGATGTT TCTCTTATGA AAGAACTTGG Ssobeta G...GATACC TAAGCTTTGA ACTTTCCCGT AGGCATATGT ATAACATCAT 951 1000 Bpobgla CATTCGTACA TATCGTTTCT CGGTGTCCTG GCCACGTATA TTCCCTAATG Bpobglb TTTTTTACAT TATCGTTTTT CTGTAGCTTG GCCACGTATT ATGCC...CG Cdcbgla ACTCAAAGCC TACAGGTTTT CCATTGCATG GACAAGAATC TTTCCAGATG Ssobeta TCAAGCTCAC GCAAGAGCGT ATGATGGGAT AAAGAGTGTT TCTAAAAAAC 1001 1050 Bpobgla GTGATGGTGA AGTCAATCAA GAGGGATTGG ACTATTATCA TCGTGTAGTT Bpobglb CGGCTGGCAT TATTAACGAA GAGGGGTTGC TCTTCTACGA GCATCTGCTG Cdcbgla GTTTTGGTAC TGTGAATCAG AAAGGTCTTG AGTTTTATGA TAGACTTATC Ssobeta CAGTTGGAAT TATTTACGCT AATAGCTCAT TCCAGCCGTT AACGGATAAA 1051 1100 Bpobgla GATTTGTTGA ATGACAACGG AATTGAACCG TTTTGTACAC TGTATCACTG Bpobglb GATGAGATTG AGTTGGCTGG ACTGATCCCG ATGCTGACGC TGTATCATTG Cdcbgla AACAAACTTG TTGAAAACGG TATTGAACCG GTTGTCACCC TTTACCACTG Ssobeta GATATGGAAG CGGTAGAGAT GGCTGAAAAT GATAATAGAT GGTGGTTCTT 1101 1150 Bpobgla GGATCTGCCT CAGGCGCTAC AGGATGCCGG AGGATGGGGA AATCGTCGCA Bpobglb GGATCTACCG CAGTGGATTG AGGACGAGGG TGGATGGACA CAGCGAGAGA Cdcbgla GGACCTTCCG CAGAAGCTGC AAGACATTGG CGGCTGGGCA AACCCAGAAA Ssobeta TGATGCTATA ATAAGAGGTG AGATCACCAG AGGAAACGAG AAGATTGTAA 1151 1200 Bpobgla CAATTCAGGC ATTTGTCCAG TTTGCGGAAA CGATGTTCCG TGAGTTTCAC Bpobglb CTATCCAACA TTTTAAAACG TATGCCTCTG TAATCATGGA TCGATTCGGC Cdcbgla TTGTGAATTA TTATTTCGAT TATGCAATGC TTGTTATAAA CCGTTATAAA Ssobeta GAGATGACCT AAAGGGTAGA TTGGATTGGA TTGGAGTTAA TTATTACACT 1201 1250 Bpobgla GGTAAAATAC AGCATTGGCT GACATTCAAT GAACCGTGGT GTATCGCCTT Bpobglb GAGCGGATAA ACTGGTGGAA TACGATCAAT GAGCCTTATT GCGCCTCTAT Cdcbgla GACAAAGTAA AAAAGTGGAT AACATTCAAT GAACCTTATT GCATTGCTTT Ssobeta AGGACTGTTG TGAAGAGGAC TGAAA..AGG GATACGTTAG CTTAGGAGGT 1251 1300 Bpobgla TTTATCCAAT ATGCTGGGAG TTCATGCCCC GGGTCTGACG AATCTCCAGA Bpobglb TTTGGGCTAT GGTACAGGAG AGCATGCCCC TGGCCATGAG AACTGGAGGG Cdcbgla TTTAGGCTAC TTTCATGGAA TCCATGCACC AGGAATAAAA GATTTCAAAG Ssobeta TACGGTCACG GATGTGAGAG GAATTCTGTA AGTTTAGCGG GATTACCAAC 1301 1350 Bpobgla CTGCGATTGA TGTAGGACAT CATCTGCTGG TTGCGCATGG CCTATCTGTA Bpobglb AAGCCTTTAC TGCCGCCCAT CATATTCTGA TGTGTCATGG GATTGCCAGC Cdcbgla TTGCAATGGA TGTTGTGCAC AGCCTCATGC TTTCTCATTT TAAGGTTGTA Ssobeta CAGCGACTTC GGCTGGGAGT TCTTCCCAGA AGGTTTATAT GACGTTTTGA 1351 1400 Bpobgla CGCCGATTCC GCGAGCTTGG CACCAGTGGC CAGATCGGTA TCGCCCCAAA Bpobglb AATTTGCACA AGGAGAAAGG GTTAACGGGT AAGATTGGCA TTACGTTGAA Cdcbgla AAAGCTGTAA AAGAAAACAA TATTGATGTT GAGGTGGGAA TTACATTAAA Ssobeta CGA....AAT ACTGGAATAG ATATCATCTC TATATGTACG TTACTGAAAA 1401 1450 Bpobgla TGTCTCCTGG GCTGTTCCTT ACAGCACTTC TGAGGAAGAT AAAGCGGCTT Bpobglb CATGGAACAT GTGGATGCGG CTTCCGAGCG ACCCGAGGAC GTGGCTGCTG Cdcbgla TTTAACCCCA GTCTACCTTC AGACAGAACG ACTTGGATAT AAGGTAAGCG Ssobeta TGGTATTGCG GATGATGCCG ATTATCAAAG GCCCTATTAT TTAGTATCTC 1451 1500 Bpobgla GTGCACGCAC GAT....... .......... .TTCCCTGCA CAGTGACTGG Bpobglb CCATTAGAAG AGA....... .......... .TGGCTTTAT TAATCGTTGG Cdcbgla AAATTGAAAG AGAAATGGTT TCTTTGAGCA GCCAGCTTGA CAACCAACTT Ssobeta ACGTTTATCA AGTTCATAGA GCAATAAATA GTGGTGCAGA TGTTAGAGGG 1501 1550 Bpobgla TTTCTCCAGC CTATTTATCA AGGCTCGTAT CCTCAGTTTT TGGTAGACTG Bpobglb TTTGCGGAGC CATTGTTTAA CGGAAAGTAT CCTGAAGATA TGGTGGAATG Cdcbgla TTCCTTGATC CAGTACTTAA AGGAAGCTAT CCACAAAAGC TGTTAGATTA Ssobeta TATTTACATT GGTCTCTAGC TGATAATTA. .CGAATGGGC TTCAGGATTC 1551 1600 Bpobgla GTTT...... ...G...CGG AACAGGGAGC CACCGTACCT ATACAAGATG Bpobglb GTAC...... ...GGAACGT ATCTGAATGG ATTGGATTTT GTACAGCCTG Cdcbgla TCTTGTTCAA AAAGATTTGT TAGATAGCCA AAAAGCATTG AGCATGCAGC Ssobeta TCTATGAGGT TTGGTCTGTT AAAGGTCGAT TACAACACTA AGAGACTATA 1601 1650 Bpobgla GAGATATGGA CATTATCGGT GAGCCAATTG ATATGATTGG TATCAATTAT Bpobglb GTGATATGGA GCTGATTCAG CAACCGGGGG ATTTTTTGGG CATTAACTAT Cdcbgla AGGAAGTAAA AGAAAATTTC ATCTTCCCTG ATTTTCTTGG TATCAACTAT Ssobeta CTGGAGACCC TCAGCACTAG TATATAGGGA AATCGCCACA AATGGCGCAA 1651 1700 Bpobgla TATAGTATGT CGGTTAATCG AT....TTAA TCCGGAGGCA GGATTTCTTC Bpobglb TATACCCGTA GCATCATTCG AT....CAAC GAACGACGCT TCGTTGCTGC Cdcbgla TACACACGTG CCGTCAGGCT TTACGACGAA AATTCTAGCT GGATATTTCC Ssobeta TAACTGATGA AATAGAGCAC TTAAATAGCG TACCTCCAGT AAAGCCATTA 1701 1750 Bpobgla AATCTGAAGA AATCAATATG GGACTACCTG TAACAGATAT CGGCTGGCCG Bpobglb AAGTAGAGCA GGTTCACATG GAGGAGCCAG TAACGGACAT GGGATGGGAG Cdcbgla AATAAGATGG GAACATCCTG CAGGAG.AAT ACACCGAGAT GGGCTGGGAA Ssobeta AGGCACTAAA CTTTCTCAAG TCTCACTATA CCAAATGAGT TTTCTTTTAA 1751 1800 Bpobgla GTGGAGTCAC GTGGGCTGTA TGAGGTACTA CATTATTTGC AAAAATACGG Bpobglb ATTCACCCTG AATCTTTTTA TAAGCTGCTG ACACGGATTG AGAAGGATTT Cdcbgla GTGTTCCCGC AGGGGCTTTT CGATCTTTTG ATTTGGATT. ..AAAGAAAG Ssobeta TCTTATTCTA ATCTCATTTT CATTAGATTG CAATACTTTC ATACCTTCTA 1801 1850 Bpobgla TAACA..... .TCGATATTT ACATCACAGA GAACGGGGCT TGTATCAATG Bpobglb TAGCAAGGGC TTGCCCATTC TGATTACGGA AAATGGAGCA GCGATGAGGG Cdcbgla TTACCCACAA ATTCCAATTT ATATAACAGA AAACGGTGCT GCTTATAACG Ssobeta TATTATTTAT TTTGTACCTT TTGGGATCTA CACTTAATGT TAGCCTAATT 1851 1900 Bpobgla A...TGAGGT CGTAAACGGA AAGGTGCAAG ATGATCGTCG AATTTCCTAC Bpobglb A...TGAACT GGTAAATGGA CAGATTGAGG ATACCGGGCG TCACGGCTAT Cdcbgla ATATTGTAAC TGAAGATGGA AAAGTGCACG ATAGCAAAAG GATTGAGTAT Ssobeta GGAAAGTCAT TTAGATTTAA TACTGTTACC AGTCCATCCC TTTTAATTAT 1901 1950 Bpobgla ATGCAGCAGC ATTTGGTGCA GGTGCACCGG ACAATTCATG ATGGTCTTCA Bpobglb ATTGAAGAGC ATTTAAAGGC CTGTCATCGC TTCATTGAAG AGGGAGGTCA Cdcbgla TTAAAACAGC ACTTTGAAGC AGCAAGAAAG GCAATTGAAA ATGGTGTGGA Ssobeta TAATGAAAAT AAGAAGGGAT AAGTAGCGAT AGCCCTTATT CCGATATGG. 1951 2000 Bpobgla TGTTAAAGGC TATATGGCAT GGTCACTTTT GGACAATTTT GAGTGGGCAG Bpobglb GCTCAAGGGG TATTTTGTCT GGTCTTTCCT TGATAACTTT GAATGGGCCT Cdcbgla TTTGCGAGGC TATTTTGTGT GGTCTTTGAT GGACAATTTT GAATGGGCAA Ssobeta TCTCCAACAA TATCCCTTAT TATCTGCCTT GCAACACT.. .....AGGGT 2001 2050 Bpobgla AGGGGTATAA TATGAGATTT GGCATGATTC ATGTCGATTT TCGCACACAG Bpobglb GGGGCTACAG CAAGCGTTTT GGCATTGTGC ATATCAATTA CGAGACGCAG Cdcbgla TGGGTTATAC AAAAAGGTTT GGAATTATAT ATGTGGATTA TGAAACCCAA Ssobeta AGAACTCTGA AATCAGATAT GGTAGGTAAG TTGTAAGTGA TAGGACGTAA 2051 2100 Bpobgla GTCCGCACCC CCAAGGAAAG TTACTATTGG TATCGAAATG TAGTAAGTAA Bpobglb GAACGGACTC CCAAACAAAG TGCGCTATGG TTCAAGCAAA TGATGGCGAA Cdcbgla AAGAGAATCA AAAAAGACAG CTTCTATTTT TATCAGCAGT ATATAAAGGA Ssobeta .........A CTTTAGAGTT AGAGTAAGTG TTCTGAAAGA CTACTGGGTG 2101 2150 Bpobgla TAACTGGTT. ......GGAG ACTAGACGCT AAACAAAGAG AAATGATCTG Bpobglb GAACGGGTTT TAAATAGAAA AGGGGGATAC GATGCAGCCG TATTATTTTG Cdcbgla AAATTCGTAA ATATAAATAA AGGCGGGCTT TTGGAGAAAT TCATTTTCTC Ssobeta CAATTCGACA CCGTTATAGG CGTAAAGGAT TGGCGTAGCT CCGTTTAATG 2151 2200 Bpobgla AATATAAAGC AAATTTAGGT CTGCCTCCGC TCCCGTTTG. ......TTTA Bpobglb ACAATCAAGG ACGTTTTGTG ATTGAAAATT TTGCGCATGC CAAGCCCTTT Cdcbgla AAAAGCCCG. ..TTTTCTAT TTTCCATCCT TCATGTGAAA GTAGCCAAAT Ssobeta AAAATATAGG TCCTACAGGG AAATTGGCTT GCCTCTTGTA ATATGACCAA 2201 2250 Bpobgla AATAGGAGGT CCTCTGGGGT AATAATAGCC AAGATGAATT ACAGATGGTT Bpobglb TCCAGTTTCT TGCCCGGCAT TGCTGGTGTT CAGGGGATTC CCCTGTGGGC Cdcbgla CTTTTTTTCA AGCCCACCGC TAAACCCACC TAAGGACAAA TCTGACTTGA Ssobeta TAGAACGTTT TCCCATCCCT GGTTAACGCA TTGACACTAA CACTATCGTA 2251 2300 Bpobgla CTAGTATATA GAGACCGGCA GGAATAAAAA AATAAAAAAT GTGCATACTG Bpobglb GTATTATGTT AATCGTGGAC AAGGAATTGC GAGCTTTGGT GTGGAGGATA Cdcbgla CCACCCGATG GCATGGAACA ATTATCACAG CTGGATTTTT GCCAACAGCA Ssobeta AATCAAGTTA CCGACACCAA GAATTTTCAG TGCAGTATCC CCCAAGACTT 2301 2350 Bpobgla AAAAAAATAC TTGGC..... .......... .......... .......... Bpobglb AAAATGGAGC GATTATGGAA TTTTTTCCGG CTAACCGCAG CTATAGCCT. Cdcbgla TTTCCAACAG CTCTTGCGCC CTGTGGTTTT CCAACTTTTT CTGCAAGCTC Ssobeta CAATAAGCTT TTTAGCTGCA CTTGCTGTAA ACATTAAGTT AACTCCCCTA 2351 2400 Bpobgla .......... .......... .......... .......... .......... Bpobglb .......... .......... .......... .......... .......... Cdcbgla TCTGTAAGAA ATTACACTTC TAAATGGAAC TTTTATAAGT TCATTCCAAA Ssobeta TTAAGTAAAT CCACAATATC TAGA...... .......... .......... 2401 2437 Bpobgla .......... .......... .......... ....... Bpobglb .......... .......... .......... ....... Cdcbgla CTCTTTTTTG AAACTCCGTC CCCTGCAGCT GAAGCTT Ssobeta .......... .......... .......... .......