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- In this section you can establish or edit the coordinates according to 1 I01 000
- which the circular plasmid map will be drawn. Although limited notes 1 I01 000
- are added among the data tables below, reference to the program manual 1 I01 000
- is recommended. 1 I01 000
- 1 I01 000
- For information concerning how to move around, press <F1>. 1 I01 000
- 1 I01 000
- To exit, press <ESC>. 1 I01 000
- 1 I01 000
- 1 I01 000
- 1 I01 000
- 1 I01 000
- 1 I01 000
- 1 I01 000
- FILENAME 2 I01 000
- ┌────────────┐ 3 I01 000
- │ │ 9 E01 000
- └────────────┘ 3 I02 000
- 1 I02 000
- 1 I02 000
- PLASMID NAME 2 I02 000
- ┌────────────────────┐ 3 I02 000
- │ │ 9 E02 000
- └────────────────────┘ 3 I03 000
- 1 I03 000
- 1 I03 000
- SIZE FORM 2 I03 000
- ┌──────┐ ┌────────┐ 3 I03 000
- │ │ │circular│ 9 E03 000
- └──────┘ └────────┘ 3 I04 000
- Change with C or L 1 I04 000
- 1 I04 000
- 1 I04 000
- LINE TYPES OF THE PLASMID CIRCLE 2 I04 000
- no thickness lines pen 2 I04 000
- ┌──┬─────────┬─────┬────┐ 3 I04 000
- │ 1│ 0.000 │ 1 │ 1 │ single 9 E04 000
- │ 2│ 0.020 │ 3 │ 1 │ heavy 9 E04 000
- │ 3│ 0.030 │ 2 │ 1 │ double 9 E04 000
- │ 4│ 0.100 │ 2 │ 1 │ broad double 9 E04 000
- │ 5│ 0.000 │ 0 │ 0 │ user defined 9 E04 000
- \│ 6│ 0.000 │ 0 │ 0 │ user defined 9 E04 005
- └──┴─────────┴─────┴────┘ 3 I05 000
- In the table below, reference is made to these line types. 1 I05 000
- 1 I05 000
- 1 I05 000
- COMPOSITION OF THE PLASMID CIRCLE 2 I05 000
- from to type 2 I05 000
- ┌───────┬───────┬──┐ 3 I05 000
- │ 0 │ 1000 │ 1│ 9 E05 000
- │ │ │ │ 9 E05 000
- \│ │ │ │ 9 E05 002
- └───────┴───────┴──┘ 3 I06 000
- To add arrows to the line borders, press > or < for the forward and 1 I06 000
- the backward arrow. At contradiction, the arrow at the thicker line 1 I06 000
- dominates. CTRL-A removes an arrowhead. 1 I06 000
- Overlapping definitions are allowed here and the latest definition 1 I06 000
- overrides the others. To compose the overlaps, exit the cursor from 1 I06 000
- the table. 1 I06 000
- 1 I06 000
- 1 I06 000
- 1 I06 000
- GENES 2 I06 000
- from to D name 2 I06 000
- ┌───────┬───────┬─┬──────────────────────────────┐ 3 I06 000
- │ │ │ │ │ 9 E06 000
- \│ │ │ │ │ 9 E06 001
- └───────┴───────┴─┴──────────────────────────────┘ 3 I07 000
- Enter the genes in a clockwise direction irrespective of 1 007 000
- their actual direction. 1 007 000
- To add arrowheads to the ends of the genes, press > or < 1 I07 000
- while staying in the coordinate box. CTRL-A removes an 1 I07 000
- arrowhead. 1 I07 000
- The D-box shows the direction of the gene name 1 I07 000
- on the map. It is calculated as you exit the line if the 1 I07 000
- D-box is empty. You can edit also the D-box. 1 I07 000
- 1 I07 000
- 1 I07 000
- SITES 2 I07 000
- coordinate name type 2 I07 000
- ┌──────┬────────────────────┬──────┐ 3 I07 000
- │ │ │ │ 9 E07 000
- \ │ │ │ │ 9 E07 001
- └──────┴────────────────────┴──────┘ 3 I08 000
- If the name box is left empty, the previous name is 1 I08 000
- copied in the box. 1 I08 000
- CTRL-T changes the site type (enzyme, by default). 1 I08 000
- 1 I08 000
- 1 I08 000
- SUPPRESSION LIST 2 I08 000
- status component 2 I08 000
- ┌──────────┐ 3 I08 000
- │ active │ Draw a box around the map 9 E08 000
- │ active │ Write the plasmid name 9 E08 000
- │ active │ Write the plasmid size 9 E08 000
- │ active │ Write the site coordinates 9 E08 000
- │ active │ Write the site names 9 E08 000
- │ active │ Draw the site marks 9 E08 000
- │ active │ Write the gene names 9 E08 000
- │ active │ Draw the gene arcs 9 E08 000
- │suppressed│ Draw a box around the comments 9 E08 000
- │ active │ Write the comments 9 E08 000
- └──────────┘ 3 I09 000
- Change status by CTRL-S 1 I09 000
- 1 I09 000
- 1 I09 000
- PICTURE COMPONENTS 2 I09 000
- current default 2 I09 000
- value value component 2 I09 000
- ┌───────┬───────┐ 3 I09 000
- │ │ 0.090 │ sites: character size (y-comp) 9 E09 000
- │ │ 1.00 │ character shape (x/y ratio) 9 E09 000
- │ │ 0.070 │ genes: character size (y-comp) 9 E09 000
- │ │ 1.00 │ character shape (x/y ratio) 9 E09 000
- │ │ 0.150 │ name: character size (y-comp) 9 E09 000
- │ │ 0.67 │ character shape (x/y ratio) 9 E09 000
- │ │ 0.20 │ length of the site mark 9 E09 000
- │ │ 1 │ number of blanks after the longest enzyme name 9 E09 000
- │ │ 0.80 │ distance of the gene arcs from center 9 E09 000
- │ │ 50 │ angle of the gene arrows 9 E09 000
- │ │ 80 │ angle of the block arrows on the plasmid 9 E09 000
- │ │ 1.00 │ magnification (max ) 9 E09 000
- └───────┴───────┘ 3 I10 000
- Press CTRL-D to retain the default value. 1 I10 000
- 1 I10 000
- 1 I10 000
- COMMENTS 2 I10 000
- ┌────────────────────────────────────────────────────────────────────────┐3 I10 000
- │ │9 E10 000
- │ │9 E10 000
- │ │9 E10 000
- │ │9 E10 000
- │ │9 E10 000
- │ University of Helsinki │9 E10 000
- │ Department of Genetics │9 E10 000
- │ Arkadiankatu 7 │9 E10 000
- │ SF-OO1OO Helsinki │9 E10 000
- │ FINLAND │9 E10 000
- │ │9 E10 010
- └────────────────────────────────────────────────────────────────────────┘3 I11 000
- 1 I11 000
- 1 I11 000
- 1 I11 000
- 1 I11 000
- 1 I11 000
- 1 I11 000
- 1 I11 000
- 1 I11 000
- 1 I11 000
- 1 I11 000
- ----END
- THE USED PART OF THIS FILE ENDED TWO LINES AGO.
- THE FILE IS AN IMAGE OF THE DISPLAY FOR EDITING MAP COORDINATES
- FOR THE DRAWMAP PROGRAM.
-
- THE STRUCTURE OF THIS FILE IS:
-
- CHARACTER
- 1 \ MEANS THAT THE LINE IS NOT SHOWN ON SCREEN
- 1-75 CONTAINS THE TEXT FOR THE SCREEN
- 76 GIVES THE COLOR OF THE LINE
- 77 EMPTY
- 78-80 TELLS WHAT PART OF THE DISPLAY THE LINE BELONGS TO
- -E MEANS ACTUAL DATA LINE
- -I MEANS COMMENT LINE
- 81 EMPTY
- 82-84 NONZERO AFTER A LINE WHICH CAN BE REPEATED ACCORDING TO
- A PROGRAM PARAMETER. TELLS THE PROGRAM HOW MANY LINES
- HAVE ALREADY BEEN USED IN THE BLOCK.
