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Hierarchy For All Packages
Package Hierarchies:
org.metaqtl
,
org.metaqtl.adapter
,
org.metaqtl.algo
,
org.metaqtl.bio
,
org.metaqtl.bio.entity
,
org.metaqtl.bio.entity.adapter
,
org.metaqtl.bio.entity.bean
,
org.metaqtl.bio.entity.factory
,
org.metaqtl.bio.util
,
org.metaqtl.factory
,
org.metaqtl.graph
,
org.metaqtl.main
,
org.metaqtl.numrec
,
org.metaqtl.util
Class Hierarchy
java.lang.Object
java.util.AbstractCollection<E> (implements java.util.Collection<E>)
java.util.AbstractList<E> (implements java.util.List<E>)
java.util.ArrayList<E> (implements java.lang.Cloneable, java.util.List<E>, java.util.RandomAccess, java.io.Serializable)
org.metaqtl.bio.entity.
BioEntityCollection
(implements java.util.Collection<E>, org.metaqtl.bio.
IBioEntity
)
org.metaqtl.graph.
AnchoredElement
org.metaqtl.graph.
Layer
org.metaqtl.graph.
ChromLayer
org.metaqtl.graph.
QtlLayer
org.metaqtl.graph.
QtlPartitionLayer
org.metaqtl.graph.
QtlTreeLayer
org.metaqtl.bio.util.
BioCrossTypes
org.metaqtl.bio.entity.
BioEntity
(implements org.metaqtl.bio.
IBioEntity
)
org.metaqtl.bio.entity.
BioEntityContainer
(implements org.metaqtl.bio.
IBioEntity
)
org.metaqtl.bio.entity.
AlleleContainer
(implements org.metaqtl.bio.
IBioLocus
)
org.metaqtl.bio.entity.
Locus
(implements org.metaqtl.bio.
IBioLocus
)
org.metaqtl.bio.entity.
Marker
(implements org.metaqtl.bio.
IBioLocus
)
org.metaqtl.bio.entity.
QTL
(implements org.metaqtl.bio.
IBioLocus
)
org.metaqtl.bio.entity.
GroupContainer
(implements org.metaqtl.bio.
IBioGenome
)
org.metaqtl.bio.entity.
GeneticMap
org.metaqtl.bio.entity.
Individual
org.metaqtl.bio.entity.
IndividualContainer
(implements org.metaqtl.bio.
IBioPopulation
)
org.metaqtl.bio.entity.
Population
(implements org.metaqtl.bio.
IBioPopulation
)
org.metaqtl.bio.entity.
CrossPopulation
(implements org.metaqtl.bio.
IBioCross
)
org.metaqtl.bio.entity.
LocusContainer
(implements org.metaqtl.bio.
IBioLGroup
)
org.metaqtl.bio.entity.
LGroup
(implements org.metaqtl.bio.
IBioLGroup
)
org.metaqtl.bio.entity.
Ontology
(implements org.metaqtl.bio.
IBioOntology
)
org.metaqtl.bio.entity.
OntologyTerm
(implements org.metaqtl.bio.
IBioOntologyTerm
)
org.metaqtl.bio.entity.adapter.
BioEntityAdapter
(implements org.metaqtl.bio.
IBioAdapter
)
org.metaqtl.bio.entity.adapter.
BioEntityCollectionAdapter
(implements org.metaqtl.bio.
IBioAdapter
)
org.metaqtl.bio.entity.adapter.
GeneticMapBeanAdapter
(implements org.metaqtl.bio.
IBioAdapter
)
org.metaqtl.bio.entity.adapter.
LGroupBeanAdapter
(implements org.metaqtl.bio.
IBioAdapter
)
org.metaqtl.bio.entity.adapter.
LocusBeanAdapter
org.metaqtl.bio.entity.adapter.
OntologyBeanAdapter
org.metaqtl.bio.entity.adapter.
OntologyTermBeanAdapter
org.metaqtl.bio.entity.bean.
BioEntityBean
org.metaqtl.bio.entity.bean.
BioEntityCollectionBean
org.metaqtl.bio.entity.bean.
GeneticMapBean
org.metaqtl.bio.entity.bean.
LGroupBean
org.metaqtl.bio.entity.bean.
LocusBean
org.metaqtl.bio.entity.bean.
OntologyBean
org.metaqtl.bio.entity.bean.
OntologyTermBean
org.metaqtl.bio.entity.factory.
BioEntityFactory
org.metaqtl.bio.entity.factory.
MapChartFactory
org.metaqtl.bio.entity.factory.
MapMakerFactory
org.metaqtl.bio.entity.factory.
MapRawFactory
org.metaqtl.bio.entity.factory.
MapTabFactory
org.metaqtl.bio.entity.factory.
OntologyTabFactory
org.metaqtl.bio.entity.factory.
XmlBioEntityFactory
org.metaqtl.bio.entity.factory.
XmlBioEntitiesFactory
org.metaqtl.bio.entity.factory.
XmlGeneticMapFactory
org.metaqtl.bio.entity.factory.
XmlOntologyFactory
org.metaqtl.bio.util.
BioEntityNameComparator
(implements java.util.Comparator<T>)
org.metaqtl.bio.util.
BioLocusTypes
org.metaqtl.bio.util.
BioUtilities
org.metaqtl.graph.
ChromAxe
org.metaqtl.
ChromCluster
org.metaqtl.
ChromCluster.ClusterEdge
org.metaqtl.
ChromCluster.ClusterGraph
org.metaqtl.graph.
ChromGraph
org.metaqtl.graph.
ChromLayer.CMrkTickPath
org.metaqtl.graph.
ChromLayer.CMrkTickPoint
org.metaqtl.
Chromosome
org.metaqtl.adapter.
ChromosomeAdapter
org.metaqtl.
CMarkerSequence
org.metaqtl.main.
CmdLineParser
org.metaqtl.main.
CmdLineParser.Option
org.metaqtl.main.
CmdLineParser.Option.BooleanOption
org.metaqtl.main.
CmdLineParser.Option.DoubleOption
org.metaqtl.main.
CmdLineParser.Option.IntegerOption
org.metaqtl.main.
CmdLineParser.Option.LongOption
org.metaqtl.main.
CmdLineParser.Option.StringOption
org.metaqtl.algo.
CMSAlgorithm
org.metaqtl.factory.
DubiousLocusFactory
org.metaqtl.algo.
EMAlgorithm
org.metaqtl.
EMCriteria
(implements java.io.Serializable)
org.metaqtl.
EMResult
org.metaqtl.factory.
EMResultFactory
org.metaqtl.util.
GeneticMapProperties
org.metaqtl.graph.
GraphFactory
org.metaqtl.graph.
GraphShape
org.metaqtl.graph.
ChromShape
org.metaqtl.graph.
QtlShape
org.metaqtl.algo.
HClustAlgorithm
org.metaqtl.bio.util.
LGroupPosition
(implements org.metaqtl.bio.util.
ILGroupPosition
)
org.metaqtl.bio.util.
EstimatedLocusPosition
org.metaqtl.bio.util.
StaticLocusPosition
org.metaqtl.bio.util.
LocusPositionComparator
(implements java.util.Comparator<T>)
org.metaqtl.util.
LocusProperties
org.metaqtl.
MapCluster
org.metaqtl.factory.
MapDBFactory
org.metaqtl.util.
MappingFunction
org.metaqtl.algo.
MetaAlgorithm
(implements org.metaqtl.
IMetaAlgorithm
)
org.metaqtl.algo.
ClustAlgorithm
org.metaqtl.algo.
QtlClustAlgorithm
org.metaqtl.algo.
QtlTreeAlgorithm
org.metaqtl.algo.
MetaMapAlgorithm
org.metaqtl.algo.
QtlProjAlgorithm
org.metaqtl.
MetaChrom
org.metaqtl.
MetaDico
org.metaqtl.factory.
MetaDicoFactory
org.metaqtl.graph.
MetaGraph
org.metaqtl.graph.
MetaGraphPar
org.metaqtl.factory.
MetaGraphParFactory
org.metaqtl.main.
MetaMain
org.metaqtl.main.
A2Xml
org.metaqtl.main.
ConsMap
org.metaqtl.main.
InfoMap
org.metaqtl.main.
MapView
org.metaqtl.main.
MetaDB
org.metaqtl.main.
MMapView
org.metaqtl.main.
MQTLView
org.metaqtl.main.
QTLClust
org.metaqtl.main.
QTLClustInfo
org.metaqtl.main.
QTLModel
org.metaqtl.main.
QTLProj
org.metaqtl.main.
QTLTree
org.metaqtl.main.
Xml2A
org.metaqtl.
MetaMap
org.metaqtl.adapter.
MetaMapAdapter
org.metaqtl.factory.
MetaMapSummaryFactory
org.metaqtl.
MetaQtlAnalysis
org.metaqtl.adapter.
MetaQtlAnalysisAdapter
org.metaqtl.factory.
MetaQtlAnalysisFactory
org.metaqtl.factory.
MetaQtlAnalysisModelFactory
org.metaqtl.factory.
MetaQtlAnalysisSummaryFactory
org.metaqtl.
MetaQtlData
org.metaqtl.
MetaQtlModel
org.metaqtl.factory.
MetaQtlModelFactory
org.metaqtl.
MetaQtlResult
org.metaqtl.
MultiFitResult
org.metaqtl.bio.util.
NumberFormat
org.metaqtl.numrec.
NumericalUtilities
org.metaqtl.util.
OffspringManager
org.metaqtl.util.
OffspringManager.HaldaneWaddingtonProportion
org.metaqtl.graph.
PaletteColor
org.metaqtl.bio.entity.bean.
PropertyBean
org.metaqtl.
Qtl
org.metaqtl.
Qtl.QTLCross
(implements java.io.Serializable)
org.metaqtl.
Qtl.QTLProj
(implements java.io.Serializable)
org.metaqtl.
Qtl.QTLStats
(implements java.io.Serializable)
org.metaqtl.
Qtl.QTLSupport
(implements java.io.Serializable)
org.metaqtl.
Qtl.QTLTrait
(implements java.io.Serializable)
org.metaqtl.adapter.
QtlAdapter
org.metaqtl.graph.
QtlLayerBuffer
org.metaqtl.
QtlPartition
org.metaqtl.adapter.
QtlPartitionAdapter
org.metaqtl.graph.
QtlUnit
org.metaqtl.algo.
SVDAlgorithm
org.metaqtl.bio.util.
TabulatedReader
org.metaqtl.bio.util.
TabulatedWriter
java.lang.Throwable (implements java.io.Serializable)
java.lang.Exception
org.metaqtl.main.
CmdLineParser.OptionException
org.metaqtl.main.
CmdLineParser.IllegalOptionValueException
org.metaqtl.main.
CmdLineParser.UnknownOptionException
org.metaqtl.main.
CmdLineParser.NotFlagException
org.metaqtl.main.
CmdLineParser.UnknownSuboptionException
org.metaqtl.
Tree
org.metaqtl.factory.
TreeFactory
org.metaqtl.
TreeNode
(implements java.io.Serializable)
Interface Hierarchy
org.metaqtl.bio.
IBioAdaptable
org.metaqtl.bio.
IBioAllele
org.metaqtl.bio.
IBioCross
org.metaqtl.bio.
IBioEntity
org.metaqtl.bio.
IBioAllele
org.metaqtl.bio.
IBioCross
org.metaqtl.bio.
IBioGenome
org.metaqtl.bio.
IBioIndividual
org.metaqtl.bio.
IBioLGroup
org.metaqtl.bio.
IBioLocus
org.metaqtl.bio.
IBioOntology
org.metaqtl.bio.
IBioOntologyTerm
org.metaqtl.bio.
IBioPopulation
org.metaqtl.bio.
IBioCross
org.metaqtl.bio.
IBioGenome
org.metaqtl.bio.
IBioIndividual
org.metaqtl.bio.
IBioLGroup
org.metaqtl.bio.
IBioLocus
org.metaqtl.bio.
IBioOntology
org.metaqtl.bio.
IBioOntologyTerm
org.metaqtl.bio.
IBioPopulation
org.metaqtl.bio.
IBioCross
org.metaqtl.bio.
IBioAdapter
org.metaqtl.bio.entity.
IBioConstants
org.metaqtl.bio.
IBioCrossTypes
org.metaqtl.bio.
IBioEntityTypes
org.metaqtl.
IBioGenomeProperties
org.metaqtl.bio.
IBioIndividualTree
org.metaqtl.
IBioLGroupProperties
org.metaqtl.
IBioLocusProperties
org.metaqtl.bio.entity.
IGeneticMapProperties
org.metaqtl.bio.util.
ILGroupPosition
org.metaqtl.
IMetaAlgorithm
org.metaqtl.
IMetaQtlConstants
org.metaqtl.bio.
IOntologyTermProperties
org.metaqtl.numrec.
NumericalUtilities.Function
org.metaqtl.numrec.
NumericalUtilities.NRFunction
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