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java.lang.Objectorg.metaqtl.util.GeneticMapProperties
public final class GeneticMapProperties
General comments must be added here.
Constructor Summary | |
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GeneticMapProperties()
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Method Summary | |
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static CrossPopulation |
getCrossDesign(IBioGenome map)
This routine returns an object which handle the properties of the offspring which have been used to create the genetic map. |
static CrossPopulation |
getMappingCross(IBioGenome map)
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static int |
getMappingFunction(IBioGenome map)
This methods returns the integer code of the mapping function associated to the given genetic map. |
static int |
getMappingUnit(IBioGenome map)
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static boolean |
needToBeRescaled(IBioGenome map)
Returns true if the given map need to be rescaled - due to the mapping extansion for some pedigree designs. |
static void |
setCrossDesign(IBioGenome map,
CrossPopulation crossDesign)
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static void |
setMappingContext(IBioGenome map,
int mapping_function,
int mapping_unit)
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Methods inherited from class java.lang.Object |
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clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
Constructor Detail |
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public GeneticMapProperties()
Method Detail |
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public static int getMappingFunction(IBioGenome map)
IConsensusConstants, IGeneticMapProperties.
public static CrossPopulation getCrossDesign(IBioGenome map)
map
- a genetic map
IConsensusConstants, IGeneticMapProperties.
public static int getMappingUnit(IBioGenome map)
map
-
public static boolean needToBeRescaled(IBioGenome map)
map
-
public static void setMappingContext(IBioGenome map, int mapping_function, int mapping_unit)
map
- mapping_function_haldane
- mapping_unit_cm
- public static void setCrossDesign(IBioGenome map, CrossPopulation crossDesign)
map
- crossDesign
- public static CrossPopulation getMappingCross(IBioGenome map)
map
-
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