|
||||||||||
PREV NEXT | FRAMES NO FRAMES |
Packages that use MetaQtlAnalysis | |
---|---|
org.metaqtl.adapter | |
org.metaqtl.algo | |
org.metaqtl.factory | |
org.metaqtl.main |
Uses of MetaQtlAnalysis in org.metaqtl.adapter |
---|
Methods in org.metaqtl.adapter that return MetaQtlAnalysis | |
---|---|
static MetaQtlAnalysis |
MetaQtlAnalysisAdapter.adapt(Chromosome[] chromosomes)
|
Methods in org.metaqtl.adapter with parameters of type MetaQtlAnalysis | |
---|---|
static QtlPartition |
QtlPartitionAdapter.adapt(MetaQtlAnalysis analysis,
java.lang.String chrom,
java.lang.String trait,
int k)
Adapt the MetaQtlAnalysis analysis for
a given value of the number of clusters k and a
given trait name code . |
Uses of MetaQtlAnalysis in org.metaqtl.algo |
---|
Fields in org.metaqtl.algo declared as MetaQtlAnalysis | |
---|---|
protected MetaQtlAnalysis |
ClustAlgorithm.result
The result of the clustering. |
Methods in org.metaqtl.algo that return MetaQtlAnalysis | |
---|---|
MetaQtlAnalysis |
ClustAlgorithm.getResult()
When the algorithm is finished use this method to get the result. |
Uses of MetaQtlAnalysis in org.metaqtl.factory |
---|
Methods in org.metaqtl.factory that return MetaQtlAnalysis | |
---|---|
static MetaQtlAnalysis |
MetaQtlAnalysisFactory.read(java.io.InputStream stream)
|
static MetaQtlAnalysis |
MetaQtlAnalysisFactory.read(java.io.Reader reader)
|
Methods in org.metaqtl.factory with parameters of type MetaQtlAnalysis | |
---|---|
static void |
MetaQtlAnalysisFactory.write(MetaQtlAnalysis analysis,
java.io.OutputStream stream)
This methods writes out in the given stream the results
of a QTL meta-analysis. |
static void |
MetaQtlAnalysisModelFactory.write(MetaQtlAnalysis analysis,
java.io.OutputStream stream)
|
static void |
MetaQtlAnalysisSummaryFactory.write(MetaQtlAnalysis analysis,
java.io.OutputStream stream)
This method writes out the summary for a givene QTL meta-analysis result analysis on the given output stream stream . |
static void |
MetaQtlAnalysisModelFactory.write(MetaQtlAnalysis analysis,
java.io.Writer writer)
|
Uses of MetaQtlAnalysis in org.metaqtl.main |
---|
Methods in org.metaqtl.main that return MetaQtlAnalysis | |
---|---|
protected static MetaQtlAnalysis |
MetaMain.getResult(java.lang.String resFile)
|
Methods in org.metaqtl.main with parameters of type MetaQtlAnalysis | |
---|---|
static ChromGraph[] |
MetaMain.getChromGraph(Chromosome[] chroms,
boolean withQtl,
int modeQtl,
IBioOntology ontology,
MetaQtlAnalysis treeAnalysis)
|
static QtlPartition |
MetaMain.getQtlPartition(Chromosome chrom,
MetaQtlAnalysis analysis,
java.lang.String trait,
int k,
char tclust)
|
|
||||||||||
PREV NEXT | FRAMES NO FRAMES |