org.metaqtl
Class ChromCluster.ClusterGraph

java.lang.Object
  extended by org.metaqtl.ChromCluster.ClusterGraph
Enclosing class:
ChromCluster

public class ChromCluster.ClusterGraph
extends java.lang.Object


Field Summary
 java.util.Hashtable adjTable
           
 ChromCluster cluster
           
 
Constructor Summary
ChromCluster.ClusterGraph(ChromCluster cluster)
           
 
Method Summary
 void addEdge(Chromosome cur1, Chromosome cur2, CMarkerSequence cms)
           
 java.util.Hashtable getAdjacentTable()
           
 java.lang.String[] getVLabels()
           
 boolean isConnected(int nMrk)
          Test if the graph is connected
 void summarize(java.io.OutputStream stream)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Field Detail

adjTable

public java.util.Hashtable adjTable

cluster

public ChromCluster cluster
Constructor Detail

ChromCluster.ClusterGraph

public ChromCluster.ClusterGraph(ChromCluster cluster)
Parameters:
cluster -
Method Detail

isConnected

public boolean isConnected(int nMrk)
Test if the graph is connected

Returns:

addEdge

public void addEdge(Chromosome cur1,
                    Chromosome cur2,
                    CMarkerSequence cms)
Parameters:
cur1 -
cur2 -
nmc -

getAdjacentTable

public java.util.Hashtable getAdjacentTable()
Returns:

summarize

public void summarize(java.io.OutputStream stream)

getVLabels

public java.lang.String[] getVLabels()