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B
BACKGROUND_COLOR
- Static variable in class org.metaqtl.graph.
MetaGraphPar
The color of the backgroud.
base
- Static variable in class org.metaqtl.graph.
PaletteColor
BC
- Static variable in interface org.thalia.bio.
IBioCrossTypes
beta(double, double)
- Static method in class org.metaqtl.numrec.
NumericalUtilities
Returns the beta function I(a,b)
betacf(double, double, double)
- Static method in class org.metaqtl.numrec.
NumericalUtilities
Used by betai : Evaluates continued fraction for incomplete beta function by modified Lentz's method.
betai(double, double, double)
- Static method in class org.metaqtl.numrec.
NumericalUtilities
Returns the incomplete beta function Ix(a,b)
BIC
- Static variable in class org.metaqtl.
EMCriteria
bic
- Variable in class org.metaqtl.
EMCriteria
BIC_NAME
- Static variable in class org.metaqtl.
EMCriteria
BioCrossTypes
- Class in
org.thalia.bio.util
BioCrossTypes()
- Constructor for class org.thalia.bio.util.
BioCrossTypes
BioEntity
- Class in
org.thalia.bio.entity
Class Description Here
BioEntity()
- Constructor for class org.thalia.bio.entity.
BioEntity
BioEntity(String, IBioEntity)
- Constructor for class org.thalia.bio.entity.
BioEntity
BioEntityAdapter
- Class in
org.thalia.bio.entity.adapter
Class Description Here
BioEntityAdapter()
- Constructor for class org.thalia.bio.entity.adapter.
BioEntityAdapter
BioEntityBean
- Class in
org.thalia.bio.entity.bean
Class Description Here
BioEntityBean()
- Constructor for class org.thalia.bio.entity.bean.
BioEntityBean
BioEntityCollection
- Class in
org.thalia.bio.entity
Class Description Here
BioEntityCollection()
- Constructor for class org.thalia.bio.entity.
BioEntityCollection
BioEntityCollection(int)
- Constructor for class org.thalia.bio.entity.
BioEntityCollection
BioEntityCollectionAdapter
- Class in
org.thalia.bio.entity.adapter
Class Description Here
BioEntityCollectionAdapter()
- Constructor for class org.thalia.bio.entity.adapter.
BioEntityCollectionAdapter
BioEntityCollectionBean
- Class in
org.thalia.bio.entity.bean
Class Description Here
BioEntityCollectionBean()
- Constructor for class org.thalia.bio.entity.bean.
BioEntityCollectionBean
BioEntityContainer
- Class in
org.thalia.bio.entity
Class Description Here
BioEntityContainer()
- Constructor for class org.thalia.bio.entity.
BioEntityContainer
BioEntityContainer(String, IBioEntity)
- Constructor for class org.thalia.bio.entity.
BioEntityContainer
BioEntityFactory
- Class in
org.thalia.bio.entity.factory
Class Description Here
BioEntityFactory()
- Constructor for class org.thalia.bio.entity.factory.
BioEntityFactory
BioEntityNameComparator
- Class in
org.thalia.bio.util
Class Description Here
BioLocusTypes
- Class in
org.thalia.bio.util
BioLocusTypes()
- Constructor for class org.thalia.bio.util.
BioLocusTypes
BioUtilities
- Class in
org.thalia.bio.util
General comments must be added here.
BioUtilities()
- Constructor for class org.thalia.bio.util.
BioUtilities
BOX_HEIGHT
- Static variable in class org.metaqtl.graph.
GraphFactory
BOX_WIDTH
- Static variable in class org.metaqtl.graph.
GraphFactory
build(Graphics2D)
- Method in class org.metaqtl.graph.
ChromLayer
build(Graphics2D)
- Method in class org.metaqtl.graph.
Layer
Build the layer.
build(Graphics2D)
- Method in class org.metaqtl.graph.
QtlLayer
build(Graphics2D)
- Method in class org.metaqtl.graph.
QtlPartitionLayer
build(Graphics2D)
- Method in class org.metaqtl.graph.
QtlTreeLayer
buildQtlTree(MetaQtlData)
- Method in class org.metaqtl.algo.
QtlTreeAlgorithm
For the given data points this method build the tree which represents the hierarchical clustering.
buildShape(Graphics2D, Object)
- Method in class org.metaqtl.graph.
ChromShape
buildShape(Graphics2D, Object)
- Method in class org.metaqtl.graph.
GraphShape
buildShape(Graphics2D, Object)
- Method in class org.metaqtl.graph.
QtlShape
This methods create a new QtlShape from the given graphics context.
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