Class Summary |
ClustAlgorithm |
|
CMSAlgorithm |
Use this class to find common marker sequences between
two chromosomes. |
EMAlgorithm |
This class defines methods to perform the EM-algorithm
for univariate mixture of gaussians with known variances. |
HClustAlgorithm |
This class implements stantard agglomerative hierarchical
clustering methods. |
MetaAlgorithm |
|
MetaMapAlgorithm |
This class is dedicated to the construction of a consensus
genetic map from a set of genetic maps based on a Weigthed
Least Square approach. |
QtlClustAlgorithm |
This class defines methods to perform a QTL meta-analysis
on a genetic map by applying a clustering of QTL
based on a gaussian mixture model and the EM-algorihtm. |
QtlProjAlgorithm |
This class defines some methods to project QTL positions from
a genetic map to another. |
QtlTreeAlgorithm |
This class defines methods to perform agglomerative
hierarchical QTL clustering. |
SVDAlgorithm |
This class defines methods to solve usual linear algebra
problems by using Singular Value Decomposition (SVD) strategy. |