Uses of Class
org.metaqtl.ChromCluster

Packages that use ChromCluster
org.metaqtl   
org.metaqtl.algo   
org.metaqtl.main   
 

Uses of ChromCluster in org.metaqtl
 

Fields in org.metaqtl declared as ChromCluster
 ChromCluster ChromCluster.ClusterGraph.cluster
           
 

Methods in org.metaqtl that return ChromCluster
 ChromCluster[] MapCluster.getClusters()
          Returns the chromosome clusters.
 

Constructors in org.metaqtl with parameters of type ChromCluster
ChromCluster.ClusterGraph(ChromCluster cluster)
           
MetaChrom(MultiFitResult result, ChromCluster chromCluster)
          Get a new instance of MetaChrom which is initialized by using the result of the merge of the members of a ChromCluster.
 

Uses of ChromCluster in org.metaqtl.algo
 

Methods in org.metaqtl.algo with parameters of type ChromCluster
protected  MetaChrom MetaMapAlgorithm.buildMetaChrom(ChromCluster cluster)
          For a cluster of chromosomes cluster this method builds the consensus chromosome using a Weighted Least Square strategy and returns the result as a MetaChrom object.
 void QtlProjAlgorithm.checkProjection(ChromCluster[] chromClusters)
           
 void QtlProjAlgorithm.doProjection(ChromCluster[] chromClusters)
           
 

Uses of ChromCluster in org.metaqtl.main
 

Methods in org.metaqtl.main that return ChromCluster
static ChromCluster[] MetaMain.getClusterByNames(ChromCluster[] clusters, java.lang.String[] chromNames)
           
 

Methods in org.metaqtl.main with parameters of type ChromCluster
static ChromCluster[] MetaMain.getClusterByNames(ChromCluster[] clusters, java.lang.String[] chromNames)