4.3 MMapDraw

CMapDraw displays two chromosomes, each from a different genetic map. This program is usefull to compare two linkage groups.

4.3.0.1 Command Line Options

Option Long Usage Type Explanation
-m –mapdir required string The directory which contains the XML files.
-o –output required string The output file name.
-t –mrkthresh optional integer The threshold on the occurence of the markers.

For example,

     
     %java org.metatqtl.main.InfoMap -m MetaDB/xml -t 2 -o info.txt
4.3.0.2 Graphic Parameters