Molecule Control
Use this pane to alter the appearance of the molecule to the right.
Load a molecule for viewing:
Enter the PDB ID of the molecule you want to view. Load 1TSR if you are using the example p53 alignment.
Choose the location of the server from which you wish to download the structure.
West Coast - United States
East Coast1 - United States
East Coast2 - United States
United Kingdom
Singapore
Japan
Brazil
Alternatively, load a PDB file from a local disk.
Adjust the view of the molecule:
Move left and right:
Move up and down:
Zoom in and out:
Reset the view to its original state:
Save and restore specific views of the molecule:
View 1
View 2
View 3
View 4
View 5
Adjust the appearance of the molecule:
Toggle list:
Residue labels
Atom labels
Small label font
Large label font
Spin X
Spin Y
Spin Z
Slab mode
Hetero display
Specular mode
Shadow mode
Stereo mode
Dim light
Axes
Boundbox
Display mode:
Cartoon
Ribbons
Spacefill
Strands
Wireframe
Backbone
Sticks
Ball and stick
Color scheme:
Color CPK
Color by amino acid
Color by amino acid position
Color by chain
Color by temperature
Color by charge
Color by structure
Add or remove labels for specific residues. Enter a residue number, range, or set of ranges (examples are
233
,
233-300
, and
35-38,55-67,89-90
). To label all residues click
Add
without entering a number.
Send custom scripts to Chime:
Enter
Chime commands
or
RasMol commands
into the
Script
text area below:
set background white
Send a picture of the molecule to the Clipboard: